ID   L0G5Y4_ECHVK            Unreviewed;       547 AA.
AC   L0G5Y4;
DT   06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT   06-MAR-2013, sequence version 1.
DT   27-MAR-2024, entry version 57.
DE   RecName: Full=HTH luxR-type domain-containing protein {ECO:0000259|SMART:SM00421};
GN   OrderedLocusNames=Echvi_4535 {ECO:0000313|EMBL:AGA80708.1};
OS   Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).
OC   Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae;
OC   Echinicola.
OX   NCBI_TaxID=926556 {ECO:0000313|EMBL:AGA80708.1, ECO:0000313|Proteomes:UP000010796};
RN   [1] {ECO:0000313|Proteomes:UP000010796}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17526 / LMG 23754 / KMM 6221
RC   {ECO:0000313|Proteomes:UP000010796};
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H.,
RA   Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C.,
RA   Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA   Woyke T., Wu D., Brambilla E., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Echinicola vietnamensis DSM 17526.";
RL   Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the Rap family. {ECO:0000256|ARBA:ARBA00038253}.
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DR   EMBL; CP003346; AGA80708.1; -; Genomic_DNA.
DR   RefSeq; WP_015268230.1; NC_019904.1.
DR   AlphaFoldDB; L0G5Y4; -.
DR   STRING; 926556.Echvi_4535; -.
DR   KEGG; evi:Echvi_4535; -.
DR   PATRIC; fig|926556.3.peg.4792; -.
DR   eggNOG; COG0457; Bacteria.
DR   eggNOG; COG2771; Bacteria.
DR   HOGENOM; CLU_037008_0_0_10; -.
DR   OrthoDB; 1090267at2; -.
DR   Proteomes; UP000010796; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR46630; TETRATRICOPEPTIDE REPEAT PROTEIN 29; 1.
DR   PANTHER; PTHR46630:SF1; TETRATRICOPEPTIDE REPEAT PROTEIN 29; 1.
DR   Pfam; PF13424; TPR_12; 1.
DR   SMART; SM00421; HTH_LUXR; 1.
DR   SMART; SM00028; TPR; 6.
DR   SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
DR   SUPFAM; SSF48452; TPR-like; 2.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000010796};
KW   TPR repeat {ECO:0000256|ARBA:ARBA00022803};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        339..359
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          487..544
FT                   /note="HTH luxR-type"
FT                   /evidence="ECO:0000259|SMART:SM00421"
FT   COILED          372..399
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   547 AA;  63125 MW;  653F086D90A59B38 CRC64;
     MISLLRIVIS IFFLAVTFVP KTLAQIPRQL DQKLAAAQEL AKRNPELAFL TATEVYEQSL
     PQELDSITGK SQLVRGKILF QFGLYQPAAE AFYEAEHLFE HLRRPYYLAQ VNNALGEVYY
     KIKTPEDALS RHEKALELFK GIDHGEGEAE TKGFIGSMYE KMRNYPKALA YQREALGLFE
     DLGLKGHLAF VRENIGSIHE DLEQFDSAYV NFQKAYLLNS EVGDSLRLVG TLNNLGDVFR
     KTREPEKGLD YSKKAAEMSA RLGFLDAQNS AIVDISKAYA GMGDYSNAYR YLEQSRQLSE
     VVYSEESARQ IAIQEAQNQL YTKNQQISQL EQMREFDTLV KWLLVFLVLL LCVLGWVIFN
     RQKLKIRSNK ELLQQQQEIL QVKERLIATE KENRQLLELK IKTEDRAHSK SLTAQTLHLI
     DKNQMLEGIQ VKLKHILEEN PKDQKKKIRN LIKEIDFNFS HDTDWDDFKN NFEKVHQDFF
     KNLQRQTAGL TPAEMKLASL MRLNLSSKEI ASTLGISLDS LRIARYRLRK KLQLEKGESL
     QQFILCI
//