ID L0HIN5_METFS Unreviewed; 309 AA.
AC L0HIN5;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE RecName: Full=Putative HTH-type transcriptional regulatory protein Metfor_2915 {ECO:0000256|HAMAP-Rule:MF_00584};
GN OrderedLocusNames=Metfor_2915 {ECO:0000313|EMBL:AGB03895.1};
OS Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanomicrobiales; Methanoregulaceae; Methanoregula.
OX NCBI_TaxID=593750 {ECO:0000313|EMBL:AGB03895.1, ECO:0000313|Proteomes:UP000010824};
RN [1] {ECO:0000313|Proteomes:UP000010824}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22288 / NBRC 105244 / SMSP
RC {ECO:0000313|Proteomes:UP000010824};
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R.,
RA Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Imachi H.,
RA Tamaki H., Sekiguchi Y., Kamagata Y., Cadillo-Quiroz H., Zinder S.,
RA Liu W.-T., Woyke T.;
RT "Complete sequence of Methanoregula formicicum SMSP.";
RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AGB03895.1, ECO:0000313|Proteomes:UP000010824}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22288 / NBRC 105244 / SMSP
RC {ECO:0000313|Proteomes:UP000010824};
RX PubMed=25189582;
RA Yamamoto K., Tamaki H., Cadillo-Quiroz H., Imachi H., Kyrpides N.,
RA Woyke T., Goodwin L., Zinder S.H., Kamagata Y., Liu W.T.;
RT "Complete Genome Sequence of Methanoregula formicica SMSPT, a Mesophilic
RT Hydrogenotrophic Methanogen Isolated from a Methanogenic Upflow Anaerobic
RT Sludge Blanket Reactor.";
RL Genome Announc. 2:e00870-14(2014).
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DR EMBL; CP003167; AGB03895.1; -; Genomic_DNA.
DR RefSeq; WP_015286857.1; NC_019943.1.
DR AlphaFoldDB; L0HIN5; -.
DR STRING; 593750.Metfor_2915; -.
DR GeneID; 14308699; -.
DR KEGG; mfo:Metfor_2915; -.
DR eggNOG; arCOG04152; Archaea.
DR HOGENOM; CLU_075726_0_0_2; -.
DR InParanoid; L0HIN5; -.
DR OrthoDB; 31424at2157; -.
DR Proteomes; UP000010824; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR HAMAP; MF_00584; HTH_type_cro_C1; 1.
DR InterPro; IPR020886; Arc_TR_HTH.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|HAMAP-Rule:MF_00584};
KW Reference proteome {ECO:0000313|Proteomes:UP000010824};
KW Transcription {ECO:0000256|HAMAP-Rule:MF_00584};
KW Transcription regulation {ECO:0000256|HAMAP-Rule:MF_00584}.
FT DOMAIN 132..189
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 309 AA; 34316 MW; 269D4C15F41AD90F CRC64;
MSQDRQLQLV TSVMITAGFD VSERFTLRPR SFDLIARNDG TLLVIKVVSH IDSVSEEMAF
DLELISRLLG GIPLIVGERA RDAELERGAV YVRYGIYAIS PATLYDYFVE KIPPLVYASP
GGLYVNINGD ALKDLREKQN MSLGDLGNVL GVSRRTISKY ESGMGTTLDV AIRIEEFFDT
GVVEAIDLIR HEPPPPAMES EKKESDDHLQ SPMEFLQQIG ISFHTLHGAP FQALLTFDKH
TILTGYGPAQ KVVKRAALIG NLSQIAKKHA MCVITDSAKE KKIGRTLVIS EKRLHRVEDG
FELLDMLGE
//
