ID L0JF85_NATP1 Unreviewed; 449 AA.
AC L0JF85;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 24-JAN-2024, entry version 56.
DE SubName: Full=Transposase {ECO:0000313|EMBL:AGB30195.1, ECO:0000313|EMBL:ELY78478.1};
GN OrderedLocusNames=Natpe_0261 {ECO:0000313|EMBL:AGB30195.1};
GN ORFNames=C488_05487 {ECO:0000313|EMBL:ELY78478.1};
OS Natrinema pellirubrum (strain DSM 15624 / CIP 106293 / JCM 10476 / NCIMB
OS 786 / 157).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales;
OC Natrialbaceae; Natrinema.
OX NCBI_TaxID=797303 {ECO:0000313|EMBL:AGB30195.1, ECO:0000313|Proteomes:UP000010843};
RN [1] {ECO:0000313|EMBL:AGB30195.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=DSM 15624 {ECO:0000313|EMBL:AGB30195.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Pagani I., Sproer C., Anderson I., Woyke T.;
RT "Complete sequence of chromosome of Natrinema pellirubrum DSM 15624.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000010843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15624 / JCM 10476 / NCIMB 786
RC {ECO:0000313|Proteomes:UP000010843};
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Pagani I., Sproer C., Anderson I., Woyke T.;
RT "Complete sequence of chromosome of Natrinema pellirubrum DSM 15624.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000011593}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15624 {ECO:0000313|Proteomes:UP000011593};
RA Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A.,
RA Eisen J.A., Facciotti M.T.;
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:ELY78478.1, ECO:0000313|Proteomes:UP000011593}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15624 {ECO:0000313|EMBL:ELY78478.1,
RC ECO:0000313|Proteomes:UP000011593};
RX PubMed=25393412; DOI=10.1371/journal.pgen.1004784;
RA Becker E.A., Seitzer P.M., Tritt A., Larsen D., Krusor M., Yao A.I., Wu D.,
RA Madern D., Eisen J.A., Darling A.E., Facciotti M.T.;
RT "Phylogenetically driven sequencing of extremely halophilic archaea reveals
RT strategies for static and dynamic osmo-response.";
RL PLoS Genet. 10:E1004784-E1004784(2014).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
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DR EMBL; CP003372; AGB30195.1; -; Genomic_DNA.
DR EMBL; AOIE01000031; ELY78478.1; -; Genomic_DNA.
DR RefSeq; WP_006180432.1; NZ_AOIE01000031.1.
DR AlphaFoldDB; L0JF85; -.
DR STRING; 797303.Natpe_0261; -.
DR GeneID; 14334720; -.
DR KEGG; npe:Natpe_0261; -.
DR PATRIC; fig|797303.5.peg.1118; -.
DR eggNOG; arCOG00683; Archaea.
DR HOGENOM; CLU_040997_0_0_2; -.
DR OrthoDB; 295419at2157; -.
DR Proteomes; UP000010843; Chromosome.
DR Proteomes; UP000011593; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 196..296
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 317..383
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
FT REGION 393..449
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 401..430
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 431..449
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 449 AA; 52123 MW; 7A501EE8DF4B407F CRC64;
MRRVNTFEIR PLSERDEILL FEILDASASL WNELTYRRRQ AFYAGEDIWQ GDTGRYRSKY
KGTIGAAAVQ QVIRRNDEAW RGFFGLLEEG SDANPPGYWK DDEQRKLRTL VRNDQYTLEW
GKRSRLEIPV GLDLKEKYGL GYNERLRLEA RGDPRWTGKG GRLGLVYDRD TDSFRARQPV
ENATRRRRES LATVSSDDDA VAALDIGANN LVAVTTTRGD QLLYHGRPQF HRFRRTTERI
ATLQSRLGPE KWTSRRIRRH YQQRSDRRNH LQDALIRDLR EWLRDRNVSS VIVGDLGAFS
SHWCARVNEK VHLFWAYGRF QRRLREVLQG EYGIDVREVD ESGSSSQCPR CGGQNINRCK
DTFQCRECGF EGHSDVVGSE NLLFEHTDCG SMARPAAPDQ NRSGEGHREV PRLEWDDHRW
QRRDRSTKEN PVNRSTWNGK FAAGESGTA
//
