ID L0JNE5_NATP1 Unreviewed; 222 AA.
AC L0JNE5;
DT 06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT 06-MAR-2013, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE SubName: Full=Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:ELY74294.1};
DE SubName: Full=DNA binding protein {ECO:0000313|EMBL:AGB32343.1};
GN OrderedLocusNames=Natpe_2531 {ECO:0000313|EMBL:AGB32343.1};
GN ORFNames=C488_11764 {ECO:0000313|EMBL:ELY74294.1};
OS Natrinema pellirubrum (strain DSM 15624 / CIP 106293 / JCM 10476 / NCIMB
OS 786 / 157).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales;
OC Natrialbaceae; Natrinema.
OX NCBI_TaxID=797303 {ECO:0000313|EMBL:AGB32343.1, ECO:0000313|Proteomes:UP000010843};
RN [1] {ECO:0000313|Proteomes:UP000010843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15624 / JCM 10476 / NCIMB 786
RC {ECO:0000313|Proteomes:UP000010843};
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Pagani I., Sproer C., Anderson I., Woyke T.;
RT "Complete sequence of chromosome of Natrinema pellirubrum DSM 15624.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AGB32343.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=DSM 15624 {ECO:0000313|EMBL:AGB32343.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA Kyrpides N., Ivanova N., Pagani I., Sproer C., Anderson I., Woyke T.;
RT "Complete sequence of chromosome of Natrinema pellirubrum DSM 15624.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000011593}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15624 {ECO:0000313|Proteomes:UP000011593};
RA Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A.,
RA Eisen J.A., Facciotti M.T.;
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:ELY74294.1, ECO:0000313|Proteomes:UP000011593}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15624 {ECO:0000313|EMBL:ELY74294.1,
RC ECO:0000313|Proteomes:UP000011593};
RX PubMed=25393412; DOI=10.1371/journal.pgen.1004784;
RA Becker E.A., Seitzer P.M., Tritt A., Larsen D., Krusor M., Yao A.I., Wu D.,
RA Madern D., Eisen J.A., Darling A.E., Facciotti M.T.;
RT "Phylogenetically driven sequencing of extremely halophilic archaea reveals
RT strategies for static and dynamic osmo-response.";
RL PLoS Genet. 10:E1004784-E1004784(2014).
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DR EMBL; CP003372; AGB32343.1; -; Genomic_DNA.
DR EMBL; AOIE01000070; ELY74294.1; -; Genomic_DNA.
DR RefSeq; WP_006181721.1; NZ_AOIE01000070.1.
DR AlphaFoldDB; L0JNE5; -.
DR STRING; 797303.Natpe_2531; -.
DR GeneID; 14335694; -.
DR KEGG; npe:Natpe_2531; -.
DR PATRIC; fig|797303.5.peg.2373; -.
DR eggNOG; arCOG02280; Archaea.
DR HOGENOM; CLU_076274_2_0_2; -.
DR OrthoDB; 156233at2157; -.
DR Proteomes; UP000010843; Chromosome.
DR Proteomes; UP000011593; Unassembled WGS sequence.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR031803; BAT_GAF/HTH-assoc.
DR InterPro; IPR007050; HTH_bacterioopsin.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR34236; DIMETHYL SULFOXIDE REDUCTASE TRANSCRIPTIONAL ACTIVATOR; 1.
DR PANTHER; PTHR34236:SF1; DIMETHYL SULFOXIDE REDUCTASE TRANSCRIPTIONAL ACTIVATOR; 1.
DR Pfam; PF15915; BAT; 1.
DR Pfam; PF04967; HTH_10; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 4: Predicted;
KW Transcription {ECO:0000256|ARBA:ARBA00023015};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 3..136
FT /note="Bacterioopsin transcriptional activator GAF and HTH
FT associated"
FT /evidence="ECO:0000259|Pfam:PF15915"
FT DOMAIN 157..207
FT /note="HTH bat-type"
FT /evidence="ECO:0000259|Pfam:PF04967"
SQ SEQUENCE 222 AA; 24829 MW; AB105D6F187D7BE4 CRC64;
MATEASFTVP SDEFPLGTVF ERLPEATVEL ERIIPARDVV IPYFWVRGTE IDDIESAFTD
HPGVERIRSV DSVEDEYLLR VEWAVDYDDV LTVLTETEIA LIEAVGTNER WTFDIRGDDR
SDIAAFQSRC TELGIPITLT TLSALTPVET ATEAAVTETQ QEALELAYER GYFESPREVT
MAEIGDELGI TQQAVASRLR RGINHVLGDT LSDVSVDRRA DR
//
