ID   L0KZA9_METHD            Unreviewed;       745 AA.
AC   L0KZA9;
DT   06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT   06-MAR-2013, sequence version 1.
DT   27-MAR-2024, entry version 52.
DE   SubName: Full=AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:AGB50441.1};
GN   OrderedLocusNames=Metho_2282 {ECO:0000313|EMBL:AGB50441.1};
OS   Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.
OX   NCBI_TaxID=867904 {ECO:0000313|EMBL:AGB50441.1, ECO:0000313|Proteomes:UP000010866};
RN   [1] {ECO:0000313|Proteomes:UP000010866}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 15978 / NBRC 107637 / DMS1
RC   {ECO:0000313|Proteomes:UP000010866};
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Held B.,
RA   Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C.,
RA   Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA   Woyke T., Wu D., Spring S., Schroeder M., Brambilla E., Klenk H.-P.,
RA   Eisen J.A.;
RT   "Complete sequence of chromosome of Methanomethylovorans hollandica DSM
RT   15978.";
RL   Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the AAA ATPase family. CDC48 subfamily.
CC       {ECO:0000256|ARBA:ARBA00009833}.
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DR   EMBL; CP003362; AGB50441.1; -; Genomic_DNA.
DR   RefSeq; WP_015325606.1; NC_019977.1.
DR   AlphaFoldDB; L0KZA9; -.
DR   STRING; 867904.Metho_2282; -.
DR   GeneID; 14408360; -.
DR   KEGG; mhz:Metho_2282; -.
DR   HOGENOM; CLU_000688_12_2_2; -.
DR   OrthoDB; 77269at2157; -.
DR   Proteomes; UP000010866; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0043170; P:macromolecule metabolic process; IEA:UniProt.
DR   GO; GO:0006807; P:nitrogen compound metabolic process; IEA:UniProt.
DR   GO; GO:0044238; P:primary metabolic process; IEA:UniProt.
DR   GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR   CDD; cd19511; RecA-like_CDC48_r2-like; 1.
DR   Gene3D; 1.10.8.60; -; 2.
DR   Gene3D; 2.40.40.20; -; 1.
DR   Gene3D; 3.10.330.10; -; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR005938; AAA_ATPase_CDC48.
DR   InterPro; IPR041569; AAA_lid_3.
DR   InterPro; IPR009010; Asp_de-COase-like_dom_sf.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR003960; ATPase_AAA_CS.
DR   InterPro; IPR004201; Cdc48_dom2.
DR   InterPro; IPR029067; CDC48_domain_2-like_sf.
DR   InterPro; IPR003338; CDC4_N-term_subdom.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   NCBIfam; TIGR01243; CDC48; 1.
DR   PANTHER; PTHR23077; AAA-FAMILY ATPASE; 1.
DR   PANTHER; PTHR23077:SF171; ATPASE FAMILY PROTEIN 2 HOMOLOG; 1.
DR   Pfam; PF00004; AAA; 2.
DR   Pfam; PF17862; AAA_lid_3; 2.
DR   Pfam; PF02933; CDC48_2; 1.
DR   Pfam; PF02359; CDC48_N; 1.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01072; CDC48_2; 1.
DR   SMART; SM01073; CDC48_N; 1.
DR   SUPFAM; SSF50692; ADC-like; 1.
DR   SUPFAM; SSF54585; Cdc48 domain 2-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS00674; AAA; 2.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000010866}.
FT   DOMAIN          5..89
FT                   /note="CDC48 N-terminal subdomain"
FT                   /evidence="ECO:0000259|SMART:SM01073"
FT   DOMAIN          106..181
FT                   /note="CDC48"
FT                   /evidence="ECO:0000259|SMART:SM01072"
FT   DOMAIN          225..361
FT                   /note="AAA+ ATPase"
FT                   /evidence="ECO:0000259|SMART:SM00382"
FT   DOMAIN          501..639
FT                   /note="AAA+ ATPase"
FT                   /evidence="ECO:0000259|SMART:SM00382"
SQ   SEQUENCE   745 AA;  82843 MW;  E2D11EFD733012A6 CRC64;
     MDEVQIKVEK AHPNDFGRGI IRLDPSTLLS LQLSPGDIVE ITGKRKTCAK VWRADRQDWG
     QGIIRIDGFI RQNAGVSIGE RVTVKKAEFE TAAHLILAPP EGVVMEYGDH IREIIKRNIL
     KRPFVVGDVI PIISSMTQPM ASQPTGGQAI PLIAVEAEPH DSVLIVTEIT DIELRQKPVR
     GYESAARGIT YDDIGGLGDE IQRVREMIEL PLKHPELFQR LNIEPPKGII LYGPPGTGKT
     LIAKAVANES KANFLYIAGP EIMGKYYGES EERIRKIFEE AEEDAPSIVF IDEIDSIAPK
     RQNVTGEVER RVVAQLLTMM DGLEERGQVV VIGATNRLDA IDPALRRPGR FDREIEIGVP
     DAEGRLEILQ IHTRGVPLGS DADEKYLEDI AKNTQAFVGA DLLALVQEAA MRALRRVLPD
     LNLEDDLIPQ EKLEQIMLTR SDFENALREI GPSAMREVLV EIPSVKWADV GGLDIVKQEI
     IEAVEWPITK PEKFVEMGIK PPKGILLFGP PGTGKTLVAQ AVANESNANF ISIKGPEMLS
     KWVGESERAI REIFKKARQV APCVVFFDEI DSIASARSSM SEDGKVSERV VNQLLTELDG
     LEALKEIVVI AATNRPDMID PALLRAGRFD RLVLVGQSTR EGRRSIFQIH TRNIPLASNV
     SIDELANITE GYVGADIEAV CREAVMLALR EDFDIENIDM KYFMEALNKV RPTLSENLMG
     YYKKIHEFFK GGMPKEETSS YIGYR
//