ID L9WP19_9EURY Unreviewed; 256 AA.
AC L9WP19;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE SubName: Full=IclR family transcriptional regulator {ECO:0000313|EMBL:ELY50956.1};
GN ORFNames=C493_18261 {ECO:0000313|EMBL:ELY50956.1};
OS Natronolimnohabitans innermongolicus JCM 12255.
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales;
OC Natrialbaceae; Natronolimnohabitans.
OX NCBI_TaxID=1227499 {ECO:0000313|EMBL:ELY50956.1, ECO:0000313|Proteomes:UP000011602};
RN [1] {ECO:0000313|EMBL:ELY50956.1, ECO:0000313|Proteomes:UP000011602}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 12255 {ECO:0000313|EMBL:ELY50956.1,
RC ECO:0000313|Proteomes:UP000011602};
RX PubMed=25393412; DOI=10.1371/journal.pgen.1004784;
RA Becker E.A., Seitzer P.M., Tritt A., Larsen D., Krusor M., Yao A.I., Wu D.,
RA Madern D., Eisen J.A., Darling A.E., Facciotti M.T.;
RT "Phylogenetically driven sequencing of extremely halophilic archaea reveals
RT strategies for static and dynamic osmo-response.";
RL PLoS Genet. 10:E1004784-E1004784(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ELY50956.1}.
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DR EMBL; AOHZ01000084; ELY50956.1; -; Genomic_DNA.
DR RefSeq; WP_007260912.1; NZ_AOHZ01000084.1.
DR AlphaFoldDB; L9WP19; -.
DR STRING; 1227499.C493_18261; -.
DR eggNOG; arCOG02798; Archaea.
DR OrthoDB; 14763at2157; -.
DR Proteomes; UP000011602; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00090; HTH_ARSR; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011991; ArsR-like_HTH.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF35; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000011602};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..71
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 72..255
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
FT COILED 170..197
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 256 AA; 28449 MW; 9E70581203F9F1F0 CRC64;
MESTDAAEGA GVKTVRTAFE ILEALKSLDG ATTTEVAAHL DLPKSSAYNH LQTLEREGYV
VKNDQTYELG LRLLDLGAFA RQKQTLFDVA QPEMETVAEE TGELVNLLVE EGGRGIFLLR
ERGDNAVNVD SYTGQSVHLH TTALGKTILA HLSEERRASI IERHGLPQMT EKTITDRDRL
EAELEEIRTE EVAYDMEERV RGLRCVAVPI FNDETITGAV SVSGPNSRMS EDRIRDEILP
QLKHAANIIE LNQTYS
//