ID M1B971_SOLTU Unreviewed; 616 AA.
AC M1B971;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400040033};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400040033, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400040033}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400040033};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; M1B971; -.
DR PaxDb; 4113-PGSC0003DMT400040033; -.
DR EnsemblPlants; PGSC0003DMT400040033; PGSC0003DMT400040033; PGSC0003DMG400015486.
DR Gramene; PGSC0003DMT400040033; PGSC0003DMT400040033; PGSC0003DMG400015486.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_5_1; -.
DR InParanoid; M1B971; -.
DR OMA; MPMQPDY; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 99..133
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 228..262
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 438..468
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 470..505
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 616 AA; 69284 MW; A0F706AB94EDAF60 CRC64;
MLRLKRITTM DSSFLRLFTT PAIYELNSSL QKLQVQPTHH HLQQLIHSHF SNTNNNPHSS
QTYATLFHAC ACLHRLDIGQ KLHHHYTLSH HQIPPHQQQL YTINHLLNMY AKCGDLEYAH
HLFDQMLHRN IVSWTCLISA YAQYGNTDQC FRLFTKMLTH YTPNDFAYAS VLSVCDTSTS
RGRQVHALVM KTGFDTCVYV CNALIAMYSR NSGSTEAWKV FNDMEFRNIV SWNTMIALFQ
ICGQGDKAMR FFSLMHRDSC LGFDRATLVS VLSSLLGRDE IDFSWGLRSC FQLHCVSVKT
GLILDVGIVT ALVKAYSILQ GEVSDCYKLF LETNGCQDLM LWTEIIVAFS ERDPEKAILL
FGQLLREGLS LDSYAFSIAL KACAGLLTDR NALMVHCKVI KSGFVDALVL GNALIHAYAR
CGSISRASQV FEEMRYRDIV TWNSMLKAYA LHGKANEALG LYGKMDVKPD AATFVALLSA
CSHAGMVQEG IQIFDAMFAK HGIVPQLEHY ACIVDIVGRA GHIFQAEKII KEMPMQPDYV
VWSAFLGACR KHRESGLAQI AASQLKELDP ENSLGYVLMS NVYCSNHSFN EAGHLRKQMR
GLGVTKQPGL SWTDLG
//
