ID M1BE28_SOLTU Unreviewed; 1076 AA.
AC M1BE28;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE SubName: Full=Ran GTPase binding protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400043094};
GN Name=102586818 {ECO:0000313|EnsemblPlants:PGSC0003DMT400043094};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400043094, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400043094}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400043094};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR RefSeq; XP_006348176.1; XM_006348114.2.
DR AlphaFoldDB; M1BE28; -.
DR STRING; 4113.M1BE28; -.
DR PaxDb; 4113-PGSC0003DMT400043094; -.
DR EnsemblPlants; PGSC0003DMT400043094; PGSC0003DMT400043094; PGSC0003DMG400016717.
DR GeneID; 102586818; -.
DR Gramene; PGSC0003DMT400043094; PGSC0003DMT400043094; PGSC0003DMG400016717.
DR KEGG; sot:102586818; -.
DR eggNOG; ENOG502QTH2; Eukaryota.
DR InParanoid; M1BE28; -.
DR OMA; VDHDFVQ; -.
DR OrthoDB; 449262at2759; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1BE28; baseline.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd13365; PH_PLC_plant-like; 1.
DR Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR Gene3D; 2.130.10.30; Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR013591; Brevis_radix_dom.
DR InterPro; IPR027988; BRX_N.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR001849; PH_domain.
DR InterPro; IPR009091; RCC1/BLIP-II.
DR InterPro; IPR000408; Reg_chr_condens.
DR InterPro; IPR000306; Znf_FYVE.
DR InterPro; IPR017455; Znf_FYVE-rel.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR22870:SF361; FYVE-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR22870; REGULATOR OF CHROMOSOME CONDENSATION; 1.
DR Pfam; PF08381; BRX; 1.
DR Pfam; PF13713; BRX_N; 1.
DR Pfam; PF01363; FYVE; 1.
DR Pfam; PF16457; PH_12; 1.
DR Pfam; PF00415; RCC1; 5.
DR PRINTS; PR00633; RCCNDNSATION.
DR SMART; SM00064; FYVE; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF50729; PH domain-like; 1.
DR SUPFAM; SSF50985; RCC1/BLIP-II; 1.
DR PROSITE; PS51514; BRX; 1.
DR PROSITE; PS00626; RCC1_2; 1.
DR PROSITE; PS50012; RCC1_3; 7.
DR PROSITE; PS50178; ZF_FYVE; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00091}.
FT REPEAT 255..308
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 309..360
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 361..415
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 416..467
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 479..530
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 531..582
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT REPEAT 583..634
FT /note="RCC1"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00235"
FT DOMAIN 639..701
FT /note="FYVE-type"
FT /evidence="ECO:0000259|PROSITE:PS50178"
FT DOMAIN 1007..1062
FT /note="BRX"
FT /evidence="ECO:0000259|PROSITE:PS51514"
SQ SEQUENCE 1076 AA; 119194 MW; 6E0E8C64E958E42D CRC64;
MGEEHLTFDP SDRAVEQAIV ALKKGAHLLK YGRRGKPKFY PLRLSADEKF LIWYSGEKEN
QLRLSSITNV IRGQSTVILQ PEMESQCISL IYGNGERTLD LICKDQMQAE TWFVGLRAVI
SRTHHHRMVD SLKSKRGAHS CISSPAGYMR RKQNLGLSAK TIRLSQVRSL AGSPTQSFSE
RCFTDGLSCT SESFFSESSL SNVMDNFTSC SSYFEPDDLS QTRASCAGTE IQTDMLAPLL
PSSNESRPFG KNVLRDVFIW GEGAEGGCLG VGEVKLDGLS PKLLESTVML DVQAISIGRS
HASIVTKQGE VFCWGEGKNG RLGHKHDMDT ARPKLVDSLN GVRVKSVSCG EYQTCALTFS
GELYTWGDNS FCAELVGEEK KRSHWLPNRV CGSLDGVKIS YVACAEWHTA IVSTSGQLFT
YGDGTFGVLG HGNLQSVAQP KEVESLRGLW VKCVACGPWH TAAVVEVIVD RLKFNNPGGK
LFTWGDGDKG RLGHPGEETK LLPTCVAKLV EHDFIQVSCA STLTIALSST GKVYMMGSAV
HGQLGNPEAK DKSLVLVQGK LREEFITEIS SGSYHVTVLT SRGSVYTWGK GANGQLGLGD
TKDRSWPTLV ESLRDRQVEH IACGSSTTAA ICLHKSASST DQSSCKGCNM SFGITRKKQN
CYNCGLLFCR TCCSKKTPNA SLAPDKTKAF RVCDPCFYQL QRIAQSSRSS KLENHSPRPL
PITLKAVTCE KVERDEANTT SSRMMATRKY LTENNQCFDR RSANSLGESR QFSDPVTSLL
DTFPRWGQVP CPKVFRRDYG QMRTQNAHAR NSLASASPTY FVEPKFVPSA GLNMEEDLKE
SDKILLEEVC KLRTQVESLE RLCETRKEKI QECQQKVKEA WSVAKEEASK SKAAKEVIKA
LTSRLQAMSE SFFAEAEANV QAIANVLQTT STYSDSQNHI GGHRIVVPLA NAQLEERNVD
SLCGSPIVFS STLRSFYNKE NNVDSRSAEE SCREADHGQA GLRTSKVEWV EQYQLGVFIT
LTVLPSGKKG LKRVRFSRKK FTEKEAKKWW EENQLSVYKK YDVEGYENVN QVLLKK
//
