ID M1CBR5_SOLTU Unreviewed; 324 AA.
AC M1CBR5;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=Nucleic acid binding protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400064107};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400064107, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400064107}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400064107};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR AlphaFoldDB; M1CBR5; -.
DR STRING; 4113.M1CBR5; -.
DR PaxDb; 4113-PGSC0003DMT400064107; -.
DR EnsemblPlants; PGSC0003DMT400064107; PGSC0003DMT400064107; PGSC0003DMG400024911.
DR Gramene; PGSC0003DMT400064107; PGSC0003DMT400064107; PGSC0003DMG400024911.
DR eggNOG; KOG1588; Eukaryota.
DR HOGENOM; CLU_065679_0_1_1; -.
DR InParanoid; M1CBR5; -.
DR OMA; LEGWSIM; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0048024; P:regulation of mRNA splicing, via spliceosome; IBA:GO_Central.
DR Gene3D; 3.30.1370.10; K Homology domain, type 1; 1.
DR InterPro; IPR045071; BBP-like.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR PANTHER; PTHR11208:SF109; GH05812P-RELATED; 1.
DR PANTHER; PTHR11208; RNA-BINDING PROTEIN RELATED; 1.
DR SMART; SM00322; KH; 1.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 37..62
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 170..270
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT REGION 294..324
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 295..324
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 324 AA; 36533 MW; 0AC34609DB667816 CRC64;
MGVTSSTLQL ESMVHFRGHL LLQIVKGILS QQNLDNIVYM IVGYWFLVVL TCGDTLGSFS
VLREEQLYRC AKACSHSQNT LGKFDVLLHK IPKIMRATAL LSNQFVDQER MGQESPHRSV
SQHINGGQIN MGAWSAMQTE ENRLLQKMAP FQPSPLDWHV VPGTATTPVV KRVIRLDVPV
ENFPNYNFVG RILGPRGNSL KRVEAITECR VYIRGQGSVK DSIKEEKLKD KPGYEHLKEP
LHLLVEAEFP EDIIDARIDH AVSILENLLK PVDESVDVYK KQQLRELAML NGTLREESPS
MSPRMSPSMS PFSNTGMKRA KTGR
//
