ID   M1D5N6_SOLTU            Unreviewed;       673 AA.
AC   M1D5N6;
DT   03-APR-2013, integrated into UniProtKB/TrEMBL.
DT   03-APR-2013, sequence version 1.
DT   27-MAR-2024, entry version 51.
DE   SubName: Full=Pentatricopeptide repeat-containing protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400082117};
OS   Solanum tuberosum (Potato).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX   NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400082117, ECO:0000313|Proteomes:UP000011115};
RN   [1] {ECO:0000313|Proteomes:UP000011115}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX   PubMed=21743474; DOI=10.1038/nature10158;
RG   The Potato Genome Sequencing Consortium;
RT   "Genome sequence and analysis of the tuber crop potato.";
RL   Nature 475:189-195(2011).
RN   [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400082117}
RP   IDENTIFICATION.
RC   STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400082117};
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC       {ECO:0000256|ARBA:ARBA00006643}.
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DR   AlphaFoldDB; M1D5N6; -.
DR   STRING; 4113.M1D5N6; -.
DR   PaxDb; 4113-PGSC0003DMT400082117; -.
DR   EnsemblPlants; PGSC0003DMT400082117; PGSC0003DMT400082117; PGSC0003DMG400032268.
DR   Gramene; PGSC0003DMT400082117; PGSC0003DMT400082117; PGSC0003DMG400032268.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_1_1; -.
DR   InParanoid; M1D5N6; -.
DR   OMA; GKQEMAC; -.
DR   Proteomes; UP000011115; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR045215; PPR_prot_At1g15510.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 7.
DR   PANTHER; PTHR24015:SF96; OS01G0848300 PROTEIN; 1.
DR   PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 3.
DR   Pfam; PF13041; PPR_2; 4.
DR   PROSITE; PS51375; PPR; 6.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          31..65
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          101..131
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          132..166
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          234..264
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          265..299
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          366..400
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   DOMAIN          581..673
FT                   /note="DYW"
FT                   /evidence="ECO:0000259|Pfam:PF14432"
SQ   SEQUENCE   673 AA;  74746 MW;  323792374F5CC23E CRC64;
     MCLFEFSDTL YGESGEVDKA RKVFDKMSER NLVSWTSLIC GYAKSEKAEE AVALFFKMIE
     EGVMPNSVTM VCVISACAEL GDLGLAERVC GYIGKVGLKV NSVMVNALVD MYMKCGSMDK
     AKRLFEECVD RNLVLYNTVL SNYVRNGMVR EAFEVLGEML SCGGPRPDRV TLLSSISAST
     EMADVFLGKQ CHAYVLRNGL ENWDSIGNAI IDMYMTCGSQ EWACRVFDQM SNKTVVSWNS
     LIAGFLRNGD LKAACRTFNE MPESDLVSWN TMIGGLVQQS MFEDAIHLFR VMQNEGIKAD
     RVTMVSVASA CGYLGANDLA KWIYNYIEKY EICLDMQLST AFVDMFARCG DPASAMKVFN
     KMIERDVSAW TAAIGAMAME GNGKRAVELF YEMLQEGVEP DQVVFVAVLT ACSHGGLVGE
     GMEIFASMKE IHGISPQIVH YGCIVDMLGR AGLLKEALDI IKNMPMKPSD AVCGAFLAAC
     KMHKNEEIAT YAVDMISESS PDKAGIHVLL SNIYALGGKW TDVAKVRMSM KERGIKKNPG
     SSSIEVNGNI HEFTSGDEFH PEHTHICLML DEMNCSVRKA GHVPDLTNVL MDVDEQEKEF
     LLNRHSEKIA MAYGLISTSQ GHPIRIVKNL RMCSDCHSFA KFVSKVYHRH IVVRDNNRFH
     FFQGGLCSCG DYW
//