GenomeNet

Database: UniProt
Entry: M3XCT1_FELCA
LinkDB: M3XCT1_FELCA
Original site: M3XCT1_FELCA 
ID   M3XCT1_FELCA            Unreviewed;       250 AA.
AC   M3XCT1;
DT   01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2013, sequence version 1.
DT   24-JAN-2024, entry version 67.
DE   SubName: Full=Chromobox 7 {ECO:0000313|Ensembl:ENSFCAP00000024437.1};
GN   Name=CBX7 {ECO:0000313|Ensembl:ENSFCAP00000024437.1,
GN   ECO:0000313|VGNC:VGNC:60425};
OS   Felis catus (Cat) (Felis silvestris catus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis.
OX   NCBI_TaxID=9685 {ECO:0000313|Ensembl:ENSFCAP00000024437.1, ECO:0000313|Proteomes:UP000011712};
RN   [1] {ECO:0000313|Ensembl:ENSFCAP00000024437.1, ECO:0000313|Proteomes:UP000011712}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Abyssinian {ECO:0000313|Ensembl:ENSFCAP00000024437.1,
RC   ECO:0000313|Proteomes:UP000011712};
RX   PubMed=17975172; DOI=10.1101/gr.6380007;
RA   Pontius J.U., Mullikin J.C., Smith D.R., Lindblad-Toh K., Gnerre S.,
RA   Clamp M., Chang J., Stephens R., Neelam B., Volfovsky N., Schaffer A.A.,
RA   Agarwala R., Narfstrom K., Murphy W.J., Giger U., Roca A.L., Antunes A.,
RA   Menotti-Raymond M., Yuhki N., Pecon-Slattery J., Johnson W.E., Bourque G.,
RA   Tesler G., O'Brien S.J.;
RT   "Initial sequence and comparative analysis of the cat genome.";
RL   Genome Res. 17:1675-1689(2007).
RN   [2] {ECO:0000313|Ensembl:ENSFCAP00000024437.1, ECO:0000313|Proteomes:UP000011712}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Abyssinian {ECO:0000313|Ensembl:ENSFCAP00000024437.1,
RC   ECO:0000313|Proteomes:UP000011712};
RA   Hillier L.W., Warren W., Obrien S., Wilson R.K.;
RT   "Sequence assembly of the Felis catus genome version 6.2.";
RL   Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|Ensembl:ENSFCAP00000024437.1}
RP   IDENTIFICATION.
RC   STRAIN=breed Abyssinian {ECO:0000313|Ensembl:ENSFCAP00000024437.1};
RG   Ensembl;
RL   Submitted (SEP-2023) to UniProtKB.
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DR   EMBL; AANG04001989; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_003989318.1; XM_003989269.3.
DR   AlphaFoldDB; M3XCT1; -.
DR   STRING; 9685.ENSFCAP00000024437; -.
DR   PaxDb; 9685-ENSFCAP00000024437; -.
DR   Ensembl; ENSFCAT00000023983.4; ENSFCAP00000024437.1; ENSFCAG00000026160.4.
DR   GeneID; 101082836; -.
DR   KEGG; fca:101082836; -.
DR   CTD; 23492; -.
DR   VGNC; VGNC:60425; CBX7.
DR   eggNOG; KOG2748; Eukaryota.
DR   GeneTree; ENSGT00940000158365; -.
DR   HOGENOM; CLU_042051_1_0_1; -.
DR   InParanoid; M3XCT1; -.
DR   OMA; KPHKAHK; -.
DR   OrthoDB; 75895at2759; -.
DR   Proteomes; UP000011712; Chromosome B4.
DR   Bgee; ENSFCAG00000026160; Expressed in prefrontal cortex and 10 other cell types or tissues.
DR   GO; GO:0000785; C:chromatin; IEA:Ensembl.
DR   GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR   GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR   GO; GO:0031519; C:PcG protein complex; IBA:GO_Central.
DR   GO; GO:0035102; C:PRC1 complex; IEA:InterPro.
DR   GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   CDD; cd18646; CD_Cbx7; 1.
DR   Gene3D; 2.40.50.40; -; 1.
DR   InterPro; IPR043000; CBX7.
DR   InterPro; IPR033773; CBX7_C.
DR   InterPro; IPR016197; Chromo-like_dom_sf.
DR   InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR   InterPro; IPR017984; Chromo_dom_subgr.
DR   InterPro; IPR023780; Chromo_domain.
DR   InterPro; IPR023779; Chromodomain_CS.
DR   PANTHER; PTHR47277; CHROMOBOX PROTEIN HOMOLOG 7; 1.
DR   PANTHER; PTHR47277:SF1; CHROMOBOX PROTEIN HOMOLOG 7; 1.
DR   Pfam; PF17218; CBX7_C; 1.
DR   Pfam; PF00385; Chromo; 1.
DR   PRINTS; PR00504; CHROMODOMAIN.
DR   SMART; SM00298; CHROMO; 1.
DR   SUPFAM; SSF54160; Chromo domain-like; 1.
DR   PROSITE; PS00598; CHROMO_1; 1.
DR   PROSITE; PS50013; CHROMO_2; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000011712}.
FT   DOMAIN          11..69
FT                   /note="Chromo"
FT                   /evidence="ECO:0000259|PROSITE:PS50013"
FT   REGION          148..217
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        155..171
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   250 AA;  28320 MW;  157F69F0D65A0003 CRC64;
     MELSAIGEQV FAVESIRKKR VRKGKVEYLV KWKGWPPKYS TWEPEEHILD PRLVMAYEEK
     EERDRASGYR KRGPKPKRLL LQRLYSMDLR SSHKAKGKEK LCFSLTRPLG SGSPEGVVKA
     GAPELVDKGP LVPTLPFPLR KPRKAHKYLR LSRKKFPPRG PDLESHSHPR ELFLQEPAAP
     DVLQAASEWE PAEQPPEEED ADLAEGPPPW TPVLPPSEVT VTDITANSVT VTFREAQAAE
     GFFRDRGGKF
//
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