GenomeNet

Database: UniProt
Entry: M3XKT0_LATCH
LinkDB: M3XKT0_LATCH
Original site: M3XKT0_LATCH 
ID   M3XKT0_LATCH            Unreviewed;       367 AA.
AC   M3XKT0;
DT   01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2013, sequence version 1.
DT   27-MAR-2024, entry version 49.
DE   SubName: Full=MAM and LDL receptor class A domain containing 1 {ECO:0000313|Ensembl:ENSLACP00000023336.1};
GN   Name=MALRD1 {ECO:0000313|Ensembl:ENSLACP00000023336.1};
OS   Latimeria chalumnae (Coelacanth).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Coelacanthiformes; Coelacanthidae; Latimeria.
OX   NCBI_TaxID=7897 {ECO:0000313|Ensembl:ENSLACP00000023336.1, ECO:0000313|Proteomes:UP000008672};
RN   [1] {ECO:0000313|Proteomes:UP000008672}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Wild caught {ECO:0000313|Proteomes:UP000008672};
RA   Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA   MacCallum I., Young S., Walker B.J., Lander E., Lindblad-Toh K.;
RT   "The draft genome of Latimeria chalumnae.";
RL   Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSLACP00000023336.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00076}.
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DR   EMBL; AFYH01074294; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01074295; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01074296; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01074297; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01074298; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01074299; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01074300; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01074301; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01074302; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AFYH01074303; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   AlphaFoldDB; M3XKT0; -.
DR   Ensembl; ENSLACT00000026530.1; ENSLACP00000023336.1; ENSLACG00000010137.2.
DR   GeneTree; ENSGT00940000158809; -.
DR   HOGENOM; CLU_627842_0_0_1; -.
DR   Proteomes; UP000008672; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   CDD; cd00112; LDLa; 3.
DR   Gene3D; 2.60.120.200; -; 1.
DR   Gene3D; 2.10.25.10; Laminin; 1.
DR   Gene3D; 4.10.400.10; Low-density Lipoprotein Receptor; 3.
DR   InterPro; IPR013320; ConA-like_dom_sf.
DR   InterPro; IPR000742; EGF-like_dom.
DR   InterPro; IPR036055; LDL_receptor-like_sf.
DR   InterPro; IPR023415; LDLR_class-A_CS.
DR   InterPro; IPR002172; LDrepeatLR_classA_rpt.
DR   InterPro; IPR000998; MAM_dom.
DR   PANTHER; PTHR22722; LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED; 1.
DR   PANTHER; PTHR22722:SF14; MEGALIN, ISOFORM A; 1.
DR   Pfam; PF00057; Ldl_recept_a; 3.
DR   Pfam; PF00629; MAM; 1.
DR   PRINTS; PR00261; LDLRECEPTOR.
DR   SMART; SM00192; LDLa; 3.
DR   SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
DR   SUPFAM; SSF57196; EGF/Laminin; 1.
DR   SUPFAM; SSF57424; LDL receptor-like module; 3.
DR   PROSITE; PS00022; EGF_1; 1.
DR   PROSITE; PS50026; EGF_3; 1.
DR   PROSITE; PS01209; LDLRA_1; 1.
DR   PROSITE; PS50068; LDLRA_2; 3.
DR   PROSITE; PS50060; MAM_2; 1.
PE   4: Predicted;
KW   Disulfide bond {ECO:0000256|ARBA:ARBA00023157, ECO:0000256|PROSITE-
KW   ProRule:PRU00076}; EGF-like domain {ECO:0000256|PROSITE-ProRule:PRU00076};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008672};
KW   Signal {ECO:0000256|ARBA:ARBA00022729};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        257..280
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          1..71
FT                   /note="MAM"
FT                   /evidence="ECO:0000259|PROSITE:PS50060"
FT   DOMAIN          206..240
FT                   /note="EGF-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50026"
FT   REGION          347..367
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   DISULFID        101..116
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00124"
FT   DISULFID        130..142
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00124"
FT   DISULFID        137..155
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00124"
FT   DISULFID        149..164
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00124"
FT   DISULFID        230..239
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00076"
SQ   SEQUENCE   367 AA;  39842 MW;  250D5DE575F8FF16 CRC64;
     MGTLKVYTVG ESGINLLMWS ISGNKGNQWI YTNVIISNNS PFHVAFEAEV GGDRQTDIAL
     DDISFTPECT IGGPIPQPTT CRTDFFQCLH VHQCIPLLWK CDGEEDCKDG TDEFNCPTRS
     PGTLPPQGSC SKTEFQCSSE ECIPSLLRCD GVSDCPRAED EYRCPTAACF NGSLLCGSTG
     KCIPVSKRCD GTVDCSDFNP DESSCSECPT GYCKNGGSCV IENRIPLCQC TQEWRGNRCH
     FMVKPTLSPT VGSRSGAFWV GVSFGLALIV IGLIAVLCFL SKKKLPTKIS TEIKYGTMDN
     PVYGDQSVDG TSEFVMNDVF PGVNISVFPW RKQQEGSSHT ANSVSFANPL YESTPGNTEE
     TSKSSEV
//
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