ID M5C608_THACB Unreviewed; 1065 AA.
AC M5C608;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Retrotransposable element Tf2 155 kDa protein type 1 {ECO:0000313|EMBL:CCO34841.1};
GN ORFNames=BN14_08950 {ECO:0000313|EMBL:CCO34841.1};
OS Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) (Lettuce bottom
OS rot fungus) (Rhizoctonia solani).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Cantharellales; Ceratobasidiaceae; Rhizoctonia; Rhizoctonia solani AG-1.
OX NCBI_TaxID=1108050 {ECO:0000313|EMBL:CCO34841.1, ECO:0000313|Proteomes:UP000012065};
RN [1] {ECO:0000313|EMBL:CCO34841.1, ECO:0000313|Proteomes:UP000012065}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AG1-IB / isolate 7/3/14 {ECO:0000313|Proteomes:UP000012065};
RX PubMed=23280342; DOI=10.1016/j.jbiotec.2012.12.010;
RA Wibberg D.W., Jelonek L.J., Rupp O.R., Hennig M.H., Eikmeyer F.E.,
RA Goesmann A.G., Hartmann A.H., Borriss R.B., Grosch R.G., Puehler A.P.,
RA Schlueter A.S.;
RT "Establishment and interpretation of the genome sequence of the
RT phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14.";
RL J. Biotechnol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCO34841.1}.
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DR EMBL; CAOJ01013730; CCO34841.1; -; Genomic_DNA.
DR AlphaFoldDB; M5C608; -.
DR HOGENOM; CLU_000384_38_0_1; -.
DR Proteomes; UP000012065; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd00303; retropepsin_like; 1.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR017984; Chromo_dom_subgr.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR24559:SF437; RIBONUCLEASE H; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF00385; Chromo; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR PRINTS; PR00504; CHROMODOMAIN.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 148..327
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 699..858
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT DOMAIN 996..1056
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT REGION 529..552
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1065 AA; 122155 MW; A6EB2BBC2A3469A9 CRC64;
MLDGSNPKQG KIWKKASLTF SFDGRTMTHD FLISPIGSHN AILGIKWLEK ESPEIDWTTR
QLSLPLPSPE TAAIAQEEEV DDSPLVGIPE QYHVYAKVFG EEEFNKLPPH RHYDIGIELT
EEGPLNSPLY SMTDAESVTL KEWLDAELKA GKIRPSKSPI SSPVMFVPKK DGSRRLVVDY
RRLNNRTKKN VYPLPRPDDL MSKLRGAKIF TKLDLRWGYN NVRVKEGDEW KTAFRTKYGL
FESLVMTFGL TNAPAAFQYF MNDLFQDLLD VYVIIYLDDI LIFSKNEAEH EFHVHEVLQR
LETAQLFCKG SKCEFHRTKV EYLGIIVSDQ GFSLDKLKIQ AVQEWPIPTT VKQVQSFLGF
ANFLRRFVAN FSHMARPLHN LVKKETTWKW TEKEQAAFEG LKRAITEAPV LAHADPDKEY
FLETDASGAA LGSVLSQRQS DGRLHPIGFL SESFKGAEIN YDTHDKELLA IIRSLEHWRI
YLEATPEPIT VFTNHRNLEY WKESRTFNRR HARWHLLLSD FNFRITYRPG KQSGKPNALS
RRSDHADIPP ENQSMLPHSV FANLATILPE KEIQQQIESS LHLDESLDEI LAHLQEESKA
PPSVKKGFKD YEMEAGLLFY QGKILVPDVG TLRKDLLQIF HDSPLAGHPG RQRTLELLSR
SYYWPGIRAD VYIHVDSCET CQRIKLPKPK LIPAQPLEVP SRPWQHISYD FITDLPKDGP
YENVLMVVDS FTKYGLMIAC SKKTKAPELV EIFLRHVWSS FGMPEKTVSD RGTVFNNKFL
KALYQRLGID PHFSSAYHPQ SDGQTERLNP TLEHFLRAYA SVNQNDWVKW LPMAQFAYNN
AVHSSTGKSP FKALYGWEPA LTPSNVPVNV PEAEDLANTI EKQWQEIASA LRQSKDRMTR
GKNTGTPLSF EVGEEAWLDA RNVNLKTKST KLTDRRLGPF KVTEKISETA YRLELPATMR
IHDVFYVGLL SKVKKDETRV WENRPPPVTV DGEEEYIVEG IMDSRETKKG KWEYLVKWKG
YGPEESTWEP RENLKNARKF LSEYEKSLKK KALDAAKALK GGAVS
//
