ID M5XF02_PRUPE Unreviewed; 1277 AA.
AC M5XF02;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE RecName: Full=SNF2 domain-containing protein CLASSY 2 {ECO:0008006|Google:ProtNLM};
GN ORFNames=PRUPE_2G256800 {ECO:0000313|EMBL:ONI24706.1};
OS Prunus persica (Peach) (Amygdalus persica).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus.
OX NCBI_TaxID=3760 {ECO:0000313|EMBL:ONI24706.1, ECO:0000313|Proteomes:UP000006882};
RN [1] {ECO:0000313|EMBL:ONI24706.1, ECO:0000313|Proteomes:UP000006882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nemared {ECO:0000313|Proteomes:UP000006882};
RX PubMed=23525075; DOI=10.1038/ng.2586;
RA Verde I., Abbott A.G., Scalabrin S., Jung S., Shu S., Marroni F.,
RA Zhebentyayeva T., Dettori M.T., Grimwood J., Cattonaro F., Zuccolo A.,
RA Rossini L., Jenkins J., Vendramin E., Meisel L.A., Decroocq V.,
RA Sosinski B., Prochnik S., Mitros T., Policriti A., Cipriani G., Dondini L.,
RA Ficklin S., Goodstein D.M., Xuan P., Del Fabbro C., Aramini V., Copetti D.,
RA Gonzalez S., Horner D.S., Falchi R., Lucas S., Mica E., Maldonado J.,
RA Lazzari B., Bielenberg D., Pirona R., Miculan M., Barakat A., Testolin R.,
RA Stella A., Tartarini S., Tonutti P., Arus P., Orellana A., Wells C.,
RA Main D., Vizzotto G., Silva H., Salamini F., Schmutz J., Morgante M.,
RA Rokhsar D.S.;
RT "The high-quality draft genome of peach (Prunus persica) identifies unique
RT patterns of genetic diversity, domestication and genome evolution.";
RL Nat. Genet. 45:487-494(2013).
RN [2] {ECO:0000313|EMBL:ONI24706.1}
RP NUCLEOTIDE SEQUENCE.
RA Verde I., Jenkins J., Dondini L., Micali S., Pagliarani G., Vendramin E.,
RA Paris R., Aramini V., Gazza L., Rossini L., Bassi D., Troggio M., Shu S.,
RA Grimwood J.H., Tartarini S., Dettori M.T., Schmutz J.;
RT "WGS assembly of Prunus persica.";
RL Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM007652; ONI24706.1; -; Genomic_DNA.
DR EMBL; CM007652; ONI24707.1; -; Genomic_DNA.
DR EMBL; CM007652; ONI24708.1; -; Genomic_DNA.
DR RefSeq; XP_007218889.1; XM_007218827.1.
DR AlphaFoldDB; M5XF02; -.
DR EnsemblPlants; ONI24706; ONI24706; PRUPE_2G256800.
DR EnsemblPlants; ONI24707; ONI24707; PRUPE_2G256800.
DR EnsemblPlants; ONI24708; ONI24708; PRUPE_2G256800.
DR GeneID; 18786216; -.
DR Gramene; ONI24706; ONI24706; PRUPE_2G256800.
DR Gramene; ONI24707; ONI24707; PRUPE_2G256800.
DR Gramene; ONI24708; ONI24708; PRUPE_2G256800.
DR KEGG; pper:18786216; -.
DR eggNOG; KOG0390; Eukaryota.
DR HOGENOM; CLU_002499_0_0_1; -.
DR OMA; WEIPIPV; -.
DR OrthoDB; 391749at2759; -.
DR Proteomes; UP000006882; Chromosome g2.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR CDD; cd18007; DEXHc_ATRX-like; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR044567; CLSY/DRD1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45821:SF2; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2; 1.
DR PANTHER; PTHR45821; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000006882}.
FT DOMAIN 717..916
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1079..1244
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 262..283
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 335..399
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 268..283
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 335..386
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1277 AA; 146060 MW; 4721F6AE9497A1AA CRC64;
MKRKRHLYRS THPFDAYPFE ALCCGSWHPV ELLGIRSGTM TINFADNHSC VIQNKGPFPN
IRVRSRQANS YDCTCFLRPG VDVCVLSTPE NTENSEEKIR APVMVDARIN SIKRVPHESH
CSCRFYVNFY VNQGPLGSER ATLNKDAKRV GIHDIFVFQT LDRDSCANEH YRWEFSADCP
TLPRTKLLLG KFLSDISWLL VTSVLKQVSF DVRSVQRKVV YQIVGGDDDS TLSKSDNYLH
AVNFRVDDGL LVPIVVEFVP ADATGNDPTE GGPSSSSDLL GLRRSKRQNV RPERFLGCDA
PAEIEIGYIR SRPYKVDHSD DDDMHIPLSQ LFGKHARRSE EHTEAEQKVH YKKLKSSEDL
HASKSEDDLA SESEDSLECK SKIKSRKVKS DVAKRKKHQA QLAIVPLPDK RDPFALGRSH
LNANSPEKST KEGEEFPAKY YYHYSSKAKR KKNSDLDDMD FQMKWDGKVS TSRASRVYNN
RHNSIRSKRE GLSGRTYPKR SLSAGAYKEL INTFLKDMDC SNKQEPNIMD QWKEFKAGKN
PEQQNETEMP EDEDEEEMSE TEMLWKEMEL ALASAYLLDG DEGSQGSTSG GTAQKSGAGC
RHEFRLNEEI GMVCLICGFV SIEIGDVSAP FVQNTGWAAD DRKINEEQTD DKRAEYEEFN
FFHTRTSPDE PEPLSEENDN VWALIPELRR KLLFHQKKAF EFLWKNVAGS LEPALMEHKA
KKIGGCVISH SPGAGKTFLI IAFLVSYLKL FPGKRPLVLA PKTTLYTWYK EFIKWKIPIP
VYLIHGRRTY RVFKKKTVTF TGGPKPTDDV LHVLDCLEKI QKWHAQPSVL VMGYTSFLTL
MREDSKFVHR KFMAQVLRES PGIVVLDEGH NPRSTKSRLR KGLMKVETDL RILLSGTLFQ
NNFCEYFNTL CLARPKFVNE VLRQLDPKYR RKKKGKEKAR HLMEARARKL FLDQIAKKID
SNEGEDQRIQ GLNMLRNITN GFIDVYEGGN SDTLPGLQIY TLLMNTTDIQ QEILDKLQDI
MSKYHGYPLE LELLITLGSI HPWLIKTAAC ADKFFTTEQL EDLEQYKHDL HKGSKVKFVL
SLIYRVVRKE KVLIFCHNIA PVRLFLELFE MVFGWQRGRE VLVLTGDLEL FERGKVMDKF
EEAGGASRVL LASITACAEG ISLTAASRVI LLDSEWNPSK TKQAIARAFR PGQQKVVYVY
QLLATGTLEE DKYGRTTWKE WVSSMIFSEA FVEDPSRWQA EKIEDDILRE MVAEDKSKSF
HMIMKNEKAS TVVRGKD
//
