ID M7XZP0_RHOT1 Unreviewed; 317 AA.
AC M7XZP0;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=Pre-mRNA-splicing factor 38 {ECO:0000256|RuleBase:RU367025};
GN ORFNames=RHTO_00231 {ECO:0000313|EMBL:EMS25803.1};
OS Rhodotorula toruloides (strain NP11) (Yeast) (Rhodosporidium toruloides).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina;
OC Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula.
OX NCBI_TaxID=1130832 {ECO:0000313|EMBL:EMS25803.1, ECO:0000313|Proteomes:UP000016926};
RN [1] {ECO:0000313|EMBL:EMS25803.1, ECO:0000313|Proteomes:UP000016926}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NP11 {ECO:0000313|EMBL:EMS25803.1,
RC ECO:0000313|Proteomes:UP000016926};
RX PubMed=23047670; DOI=10.1038/ncomms2112;
RA Zhu Z., Zhang S., Liu H., Shen H., Lin X., Yang F., Zhou Y.J., Jin G.,
RA Ye M., Zou H., Zou H., Zhao Z.K.;
RT "A multi-omic map of the lipid-producing yeast Rhodosporidium toruloides.";
RL Nat. Commun. 3:1112-1112(2012).
CC -!- FUNCTION: Required for pre-mRNA splicing.
CC {ECO:0000256|RuleBase:RU367025}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU367025}.
CC -!- SIMILARITY: Belongs to the PRP38 family.
CC {ECO:0000256|ARBA:ARBA00006164, ECO:0000256|RuleBase:RU367025}.
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DR EMBL; KB722642; EMS25803.1; -; Genomic_DNA.
DR RefSeq; XP_016276922.1; XM_016413915.1.
DR AlphaFoldDB; M7XZP0; -.
DR GeneID; 27364244; -.
DR eggNOG; KOG2889; Eukaryota.
DR HOGENOM; CLU_039466_2_0_1; -.
DR OrthoDB; 5485563at2759; -.
DR Proteomes; UP000016926; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:UniProtKB-UniRule.
DR InterPro; IPR005037; PRP38.
DR PANTHER; PTHR23142:SF1; PRE-MRNA-SPLICING FACTOR 38A; 1.
DR PANTHER; PTHR23142; UNCHARACTERIZED; 1.
DR Pfam; PF03371; PRP38; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664,
KW ECO:0000256|RuleBase:RU367025};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187,
KW ECO:0000256|RuleBase:RU367025};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU367025};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728, ECO:0000256|RuleBase:RU367025}.
FT REGION 180..317
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 247..266
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 289..303
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 317 AA; 35669 MW; C1DB801576AD021B CRC64;
MANTTRAGAL SVHGTNPQYL VPTVIRKRVY DTLYWKEHCF ALNSATIIDR AVELKYIGGT
YANTRPTEFM CLVLKLLQLQ PEREIVLEYL RAEEFKYLRA LAAFYVRLTF DSLNAYETLE
PLLDDYRKLR FRGMDGSYSI LTMDEFVDQL LAGEMVCEIQ LPRLTQRKVL EDTEGLAPRR
SKLGKAMGVM EGLEGRSDAE DESEDEEGRG RYMSRSPSAS RSPSPVSGEE PEPEYWTEAS
GDEEDMDLDG GAQRGRDVKR RRPVVERAGS AAGSDDGDRY ISRSPSPAGS DGRYVSRSPT
RSPEPETIEV EHIDGDV
//
