ID O23602_ARATH Unreviewed; 1493 AA.
AC O23602;
DT 01-JAN-1998, integrated into UniProtKB/TrEMBL.
DT 01-JAN-1998, sequence version 1.
DT 27-MAR-2024, entry version 126.
DE SubName: Full=TRP-185 like protein {ECO:0000313|EMBL:CAB10541.1};
DE Flags: Fragment;
GN Name=dl4840c {ECO:0000313|EMBL:CAB10541.1};
GN OrderedLocusNames=At4g17610 {ECO:0000313|EMBL:CAB78764.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:CAB10541.1};
RN [1] {ECO:0000313|EMBL:CAB10541.1}
RP NUCLEOTIDE SEQUENCE.
RA Bevan M., Stiekema W., Murphy G., Wambutt R., Pohl T., Terryn N., Kreis M.,
RA Kavanagh T., Entian K.D., Rieger M., James R., Puigdomenech P.,
RA Hatzopoulos P., Obermaier B., Duesterhoft A., Jones J., Palme K.,
RA Ansorge W., Delseny M., Bancroft I., Mewes H.W., Schueller C.,
RA Chalwatzis N.;
RL Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9461215; DOI=10.1038/35140;
RA Bevan M., Bancroft I., Bent E., Love K., Goodman H.M., Dean C.,
RA Bergkamp R., Dirkse W., van Staveren M., Stiekema W., Drost L., Ridley P.,
RA Hudson S.-A., Patel K., Murphy G., Piffanelli P., Wedler H., Wedler E.,
RA Wambutt R., Weitzenegger T., Pohl T., Terryn N., Gielen J., Villarroel R.,
RA De Clercq R., van Montagu M., Lecharny A., Aubourg S., Gy I., Kreis M.,
RA Lao N., Kavanagh T., Hempel S., Kotter P., Entian K.-D., Rieger M.,
RA Schaefer M., Funk B., Mueller-Auer S., Silvey M., James R., Monfort A.,
RA Pons A., Puigdomenech P., Douka A., Voukelatou E., Milioni D.,
RA Hatzopoulos P., Piravandi E., Obermaier B., Hilbert H., Duesterhoeft A.,
RA Moores T., Jones J.D.G., Eneva T., Palme K., Benes V., Rechmann S.,
RA Ansorge W., Cooke R., Berger C., Delseny M., Voet M., Volckaert G.,
RA Mewes H.-W., Klosterman S., Schueller C., Chalwatzis N.;
RT "Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis
RT thaliana.";
RL Nature 391:485-488(1998).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RG EU;
RG CSHL and WU Arabidopsis Sequencing Project;
RA Mayer K., Schuller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Dusterhoft A., Stiekema W., Entian K.D., Terryn N., Harris B., Ansorge W.,
RA Brandt P., Grivell L., Rieger M., Weichselgartner M., de Simone V.,
RA Obermaier B., Mache R., Muller M., Kreis M., Delseny M., Puigdomenech P.,
RA Watson M., Schmidtheini T., Reichert B., Portatelle D., Perez-Alonso M.,
RA Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H.,
RA Ridley P., Langham S.A., McCullagh B., Bilham L., Robben J.,
RA Van der Schueren J., Grymonprez B., Chuang Y.J., Vandenbussche F.,
RA Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E.,
RA Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E.,
RA Brandt A., Peters S., van Staveren M., Dirske W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Kotter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., Van Montagu M., Rogers J.,
RA Cronin A., Quail M., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M.,
RA Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M.,
RA Benes V., Rechmann S., Borkova D., Blocker H., Scharfe M., Grimm M.,
RA Lohnert T.H., Dose S., de Haan M., Maarse A., Schafer M., Muller-Auer S.,
RA Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A.,
RA Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O.,
RA Quigley F., Clabauld G., Mundlein A., Felber R., Schnabl S., Hiller R.,
RA Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C.,
RA Montfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sehkon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L., Nelson J.,
RA Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J.,
RA Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffmann J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [4] {ECO:0000313|EMBL:CAB10541.1}
RP NUCLEOTIDE SEQUENCE.
RA EU Arabidopsis sequencing project;
RL Submitted (JUN-1999) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; Z97343; CAB10541.1; -; Genomic_DNA.
DR EMBL; AL161546; CAB78764.1; -; Genomic_DNA.
DR PIR; H71445; H71445.
DR ExpressionAtlas; O23602; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR Gene3D; 3.40.1280.10; -; 1.
DR InterPro; IPR029028; Alpha/beta_knot_MTases.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR001537; SpoU_MeTrfase.
DR InterPro; IPR045330; Trm3/TARBP1.
DR InterPro; IPR029026; tRNA_m1G_MTases_N.
DR PANTHER; PTHR12029:SF11; METHYLTRANSFERASE TARBP1-RELATED; 1.
DR PANTHER; PTHR12029; RNA METHYLTRANSFERASE; 1.
DR Pfam; PF00588; SpoU_methylase; 1.
DR SUPFAM; SSF75217; alpha/beta knot; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 225..245
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1252..1349
FT /note="tRNA/rRNA methyltransferase SpoU type"
FT /evidence="ECO:0000259|Pfam:PF00588"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CAB10541.1"
SQ SEQUENCE 1493 AA; 167470 MW; EFC3F8DECAA6C4E2 CRC64;
IDLLIKSSLR YDGTLKSDCN NSHHGHMETP DEEAKIFNWL EVLWNRGFRH DNPLVRCTVM
ESFFGIEWRR YKTCTQSMSQ TFVLGPFIEG LNDPTHHKDF GLKGIYTSRT IEGAAQYVSA
YTSCLNPRNR VGFLINLASL AKKQSFCRAG FMALVQCIVS TAYVVGGYGD KEMGHLEDKF
SGTAQESSCG HLSQDDMTHI LDVLKFVAES SRQHFNHKYR IRASLTILNT LKFLLLIVLF
HFLVYQKVLE TAASVVNPCN VPLGTLLQFV SAIPREFTDH DGLLRKMMLE WLQGCNRKTS
NSLCTDGTRL LASLYEYLKG FTSDNVESFD DEDLEAWDSQ TKRWARVFFL MINKEEHLTD
IIMFVQNNGL SFFQEKNHLK RAPAKFLIFI LSMLLELQNM QDGISELSSS VKSKSGIGSD
EQTGKQIVVD ASSIKKKFAV VLLSILKELI PFADSSCSIF WSHTTVENGA LPGSVIGKLG
GPSQRRLSVP TTTAVLEAVL SVKTIGLISS YCAQFTSGVG ELKLALAFFW KFTQHTISSQ
ICNSEAAAEI YLAAFEALAS VLNAFVSLCS AGAFNLLEND STLLSMVDGE FWLQVSVPAF
VRNINHLLTA GVLVRSRRAV LLSWKWLCVE SLLSVMHILD ARRIPEDRKS FFSDDTVKSI
FQDIVESLEN AGEGSALPML KSVRLALGIL ASGKSSLDGF SGVDTQTMWQ LVKSCWILHI
SCKKRRVAPI AALLSSVLHS SLFSNKDMHI TEDEHGPLKW FVEKVLEEGQ KSPRTIRLAA
LHLSGLWLMY PRTIKYYIKE LRLLTLYGSV AFDEDFEAEL SDNNDARTEV SLLAKSPDPE
LTELFINTEL YARVSVAGLF QKLANLAYMV EPASQNQDCQ DALVAGKLFL LELLDAAVHD
KDLAKELYKK YSAIHRRKIR AWQMICIMSR FVCNDIVGQV MDSVHICLHV SLQEQTERNN
LPAVRQYLET FAINIYLKFP ALVKEQLVPI LKNYDSKAQV NLRKTKMIVF ANVILHAEKI
AQQTHLRELL PPILPLLTSH HHSLRGFAQL LVHRVLFRLF PPVESTSSHT ISLEKLSFEN
LKSYLDKNPD CSRLRASMEG FLDAYDPSTS ATPAGVFVNR VEESEFECVP TCLMDNVLSF
LNDVREDLRA SMAKDVVTIK NEGFKIDEEP KRRLIMSTTD EERLSEPSSL DFQRKITLSK
HEKQDASSTS VLRNGETYKR LFEMEKEDEL VTQLLRSRSM EVERLKSGRQ SLILVASLVD
RIPNLAGLAR TCEVFKASSL AVADASIIHD KQFQLISVTA EKWVPIMEVP VNSLKLFLEK
KKREGFSILG LEQTANSVSL DKYQFPKKTR KQIPFKSSAS GKWYLLIQAH HGIIDVSKST
ESQSVFPSFS NCFRSQVPLI HLASWNLTTL SVVFISSPST ATFLAVAVSS FLTAGVDCGG
SLTITSTGSG ASTETAAVGE VDPLSEEARV TERREKRLLE RRENENLGMK LGF
//
