ID Q07JS1_RHOP5 Unreviewed; 499 AA.
AC Q07JS1;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 27-MAR-2024, entry version 97.
DE SubName: Full=Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABJ07813.1};
GN OrderedLocusNames=RPE_3887 {ECO:0000313|EMBL:ABJ07813.1};
OS Rhodopseudomonas palustris (strain BisA53).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Rhodopseudomonas.
OX NCBI_TaxID=316055 {ECO:0000313|EMBL:ABJ07813.1};
RN [1] {ECO:0000313|EMBL:ABJ07813.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BisA53 {ECO:0000313|EMBL:ABJ07813.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Pelletier D.A., Kyrpides N., Kim E., Harwood C.S., Oda Y.,
RA Richardson P.;
RT "Complete sequence of Rhodopseudomonas palustris BisA53.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: In the C-terminal section; belongs to the class-I
CC pyridoxal-phosphate-dependent aminotransferase family.
CC {ECO:0000256|ARBA:ARBA00005384}.
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DR EMBL; CP000463; ABJ07813.1; -; Genomic_DNA.
DR AlphaFoldDB; Q07JS1; -.
DR STRING; 316055.RPE_3887; -.
DR KEGG; rpe:RPE_3887; -.
DR eggNOG; COG1167; Bacteria.
DR HOGENOM; CLU_017584_0_1_5; -.
DR OrthoDB; 9808770at2; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0009058; P:biosynthetic process; IEA:InterPro.
DR CDD; cd00609; AAT_like; 1.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR004839; Aminotransferase_I/II.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR46577; HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR; 1.
DR PANTHER; PTHR46577:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR; 1.
DR Pfam; PF00155; Aminotran_1_2; 1.
DR Pfam; PF00392; GntR; 1.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..80
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
FT REGION 87..114
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 87..109
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 499 AA; 53969 MW; B17FF34B6D561DE3 CRC64;
MMPIPLDRSC DVSLQEQIYN YIRNRVTEGA LPAGKRLPAT RALAEGLQVS RNTAVLAYDR
LLAEGYVEAR SAHGTFVAKI TGTPHLRRHD PVTPEAAPPI DDDEARQWTE PPMRTSGDLR
PAFDFWYGRT DPRLFPARIW RTIGAEVLGA CATGLSEYGT ICGDPDLRRA IADHLATTRG
INAQRDQIIV TTGAQEALNL IARLFVGHDS AVALETPGYA AAAQVFEAYG GQLFSCPLDQ
NGLDPALLRG IRPKLTFVTP SHQFPTGVVM SLERRHALIR HCAQHGGLIV EDDYDSDIVF
ERAPVAAITA IDGLQRTVYV GSFSKSLGSG LRLGYVVMPT RFMQVAQAAK SLMSYGQSWL
DQQILARFMT SGRYLRHLRR LRVSYRARRD ATIDGLLATF GDECKIAGSE TGVHLCCTLP
SHGPDADAVG ARARSLGVGL YSLAVCGVRT DSADTSRSLV VGYAGLTPKE IGQAFARLKA
ATADGQGPAP SAELVARGQ
//
