ID Q084M9_SHEFN Unreviewed; 328 AA.
AC Q084M9;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 27-MAR-2024, entry version 92.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABI71286.1};
GN OrderedLocusNames=Sfri_1434 {ECO:0000313|EMBL:ABI71286.1};
OS Shewanella frigidimarina (strain NCIMB 400).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=318167 {ECO:0000313|EMBL:ABI71286.1, ECO:0000313|Proteomes:UP000000684};
RN [1] {ECO:0000313|EMBL:ABI71286.1, ECO:0000313|Proteomes:UP000000684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCIMB 400 {ECO:0000313|EMBL:ABI71286.1,
RC ECO:0000313|Proteomes:UP000000684};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H.,
RA Newman D., Tiedje J.M., Zhou J., Romine M.F., Culley D.E., Serres M.,
RA Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.;
RT "Complete sequence of Shewanella frigidimarina NCIMB 400.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP000447; ABI71286.1; -; Genomic_DNA.
DR AlphaFoldDB; Q084M9; -.
DR STRING; 318167.Sfri_1434; -.
DR KEGG; sfr:Sfri_1434; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_16_2_6; -.
DR Proteomes; UP000000684; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08422; PBP2_CrgA_like; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30537:SF72; HTH-TYPE TRANSCRIPTIONAL REGULATOR SINR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000684}.
FT DOMAIN 21..78
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 328 AA; 36899 MW; F48A92788D530E21 CRC64;
MGISVSLFEF DLFAIIRAIN MKTEDIALFH RIVETGSILE AANLLNLPKS TVSRRLQSLE
ESLNLKLFHR QSRAITLTSA GSHFYEKTLV MLADLDRTLS DITDNKAELT GHLRILIFPI
PQIMDIVSKI FAFMDENPNC SIEIITSTEP LDMVRNNIDI AFMVNETFSE LDMVAKPVIS
EDMCFFASPE YLTKAGMPVT LSDIEQHNSI LFRFPNGKTF SEVPLANDAM QAVKGNLCTN
SIQLAYEATK LGRGIGYLPQ KLCHDDVEQG ELVRLFNDLA PYTGVVFLVY PSRRFLSLTG
QRLLDYMLAQ LPVQTSEKTT TTNTKVWI
//
