ID Q10ML5_ORYSJ Unreviewed; 1462 AA.
AC Q10ML5; Q0DSJ8;
DT 22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT 22-AUG-2006, sequence version 1.
DT 27-MAR-2024, entry version 135.
DE SubName: Full=BRCA1 C Terminus domain containing protein, expressed {ECO:0000313|EMBL:ABF95512.1};
DE SubName: Full=Os03g0304400 protein {ECO:0000313|EMBL:BAS83792.1};
GN OrderedLocusNames=LOC_Os03g19190 {ECO:0000313|EMBL:ABF95512.1},
GN Os03g0304400 {ECO:0000313|EMBL:BAS83792.1};
GN ORFNames=OSNPB_030304400 {ECO:0000313|EMBL:BAS83792.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:ABF95512.1};
RN [1] {ECO:0000313|EMBL:ABF95512.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG Rice Chromosome 3 Sequencing Consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S., Luo M.,
RA Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G.,
RA Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2] {ECO:0000313|Proteomes:UP000059680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RA Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N.,
RA Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y.,
RA Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N.,
RA Fukunaka R., Hamada M., Harada C., Hayashi A., Hijishita S., Honda M.,
RA Hosokawa S., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M.,
RA Ito K., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K.,
RA Karasawa W., Kurita K., Katagiri S., Kikuta A., Kobayashi H., Kobayashi N.,
RA Machita K., Maehara T., Masukawa M., Mizubayashi T., Mukai Y., Nagasaki H.,
RA Nagata Y., Naito S., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M.,
RA Meguro A., Negishi M., Ohta I., Ohta T., Okamoto M., Ono N., Saji S.,
RA Sakaguchi M., Sakai K., Shibata M., Shimokawa T., Song J., Takazaki Y.,
RA Terasawa K., Tsugane M., Tsuji K., Ueda S., Waki K., Yamagata H.,
RA Yamamoto M., Yamamoto S., Yamane H., Yoshiki S., Yoshihara R., Yukawa K.,
RA Zhong H., Yano M., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA Moffat K., Hill J., Bera J., Fadrosh D., Jin S., Johri S., Kim M.,
RA Overton L., Reardon M., Tsitrin T., Vuong H., Weaver B., Ciecko A.,
RA Tallon L., Jackson J., Pai G., Aken S.V., Utterback T., Reidmuller S.,
RA Feldblyum T., Hsiao J., Zismann V., Iobst S., de Vazeille A.R., Buell C.R.,
RA Ying K., Li Y., Lu T., Huang Y., Zhao Q., Feng Q., Zhang L., Zhu J.,
RA Weng Q., Mu J., Lu Y., Fan D., Liu Y., Guan J., Zhang Y., Yu S., Liu X.,
RA Zhang Y., Hong G., Han B., Choisne N., Demange N., Orjeda G., Samain S.,
RA Cattolico L., Pelletier E., Couloux A., Segurens B., Wincker P., D'Hont A.,
RA Scarpelli C., Weissenbach J., Salanoubat M., Quetier F., Yu Y., Kim H.R.,
RA Rambo T., Currie J., Collura K., Luo M., Yang T., Ammiraju J.S.S.,
RA Engler F., Soderlund C., Wing R.A., Palmer L.E., de la Bastide M.,
RA Spiegel L., Nascimento L., Zutavern T., O'Shaughnessy A., Dike S.,
RA Dedhia N., Preston R., Balija V., McCombie W.R., Chow T., Chen H.,
RA Chung M., Chen C., Shaw J., Wu H., Hsiao K., Chao Y., Chu M., Cheng C.,
RA Hour A., Lee P., Lin S., Lin Y., Liou J., Liu S., Hsing Y., Raghuvanshi S.,
RA Mohanty A., Bharti A.K., Gaur A., Gupta V., Kumar D., Ravi V., Vij S.,
RA Kapur A., Khurana P., Khurana P., Khurana J.P., Tyagi A.K., Gaikwad K.,
RA Singh A., Dalal V., Srivastava S., Dixit A., Pal A.K., Ghazi I.A.,
RA Yadav M., Pandit A., Bhargava A., Sureshbabu K., Batra K., Sharma T.R.,
RA Mohapatra T., Singh N.K., Messing J., Nelson A.B., Fuks G., Kavchok S.,
RA Keizer G., Linton E., Llaca V., Song R., Tanyolac B., Young S., Ho-Il K.,
RA Hahn J.H., Sangsakoo G., Vanavichit A., de Mattos Luiz.A.T., Zimmer P.D.,
RA Malone G., Dellagostin O., de Oliveira A.C., Bevan M., Bancroft I.,
RA Minx P., Cordum H., Wilson R., Cheng Z., Jin W., Jiang J., Leong S.A.,
RA Iwama H., Gojobori T., Itoh T., Niimura Y., Fujii Y., Habara T., Sakai H.,
RA Sato Y., Wilson G., Kumar K., McCouch S., Juretic N., Hoen D., Wright S.,
RA Bruskiewich R., Bureau T., Miyao A., Hirochika H., Nishikawa T.,
RA Kadowaki K., Sugiura M., Burr B., Sasaki T.;
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3] {ECO:0000313|EMBL:ABF95512.1}
RP NUCLEOTIDE SEQUENCE.
RA Buell R., Wing R.A., McCombie W.A., Ouyang S.;
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:BAS83792.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=23299411; DOI=10.1093/pcp/pcs183;
RA Sakai H., Lee S.S., Tanaka T., Numa H., Kim J., Kawahara Y., Wakimoto H.,
RA Yang C.C., Iwamoto M., Abe T., Yamada Y., Muto A., Inokuchi H., Ikemura T.,
RA Matsumoto T., Sasaki T., Itoh T.;
RT "Rice Annotation Project Database (RAP-DB): an integrative and interactive
RT database for rice genomics.";
RL Plant Cell Physiol. 54:E6-E6(2013).
RN [5] {ECO:0000313|EMBL:BAS83792.1, ECO:0000313|Proteomes:UP000059680}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6] {ECO:0000313|EMBL:BAS83792.1}
RP NUCLEOTIDE SEQUENCE.
RA Sakai H., Kawahara Y., Matsumoto T., Buell C.R., Itoh T.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DP000009; ABF95512.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS83792.1; -; Genomic_DNA.
DR RefSeq; XP_015627825.1; XM_015772339.1.
DR AlphaFoldDB; Q10ML5; -.
DR SMR; Q10ML5; -.
DR STRING; 39947.Q10ML5; -.
DR PaxDb; 39947-Q10ML5; -.
DR EnsemblPlants; Os03t0304400-01; Os03t0304400-01; Os03g0304400.
DR GeneID; 4332589; -.
DR Gramene; Os03t0304400-01; Os03t0304400-01; Os03g0304400.
DR KEGG; osa:4332589; -.
DR eggNOG; KOG0825; Eukaryota.
DR eggNOG; KOG1929; Eukaryota.
DR HOGENOM; CLU_007582_0_0_1; -.
DR OMA; CEMPKAT; -.
DR OrthoDB; 296344at2759; -.
DR PlantReactome; R-OSA-9645850; Activation of pre-replication complex.
DR Proteomes; UP000059680; Chromosome 3.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.10190; BRCT domain; 4.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR044254; At4g02110-like.
DR InterPro; IPR001357; BRCT_dom.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR47181; BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED; 1.
DR PANTHER; PTHR47181:SF7; BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED; 1.
DR Pfam; PF00533; BRCT; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF12738; PTCB-BRCT; 1.
DR SMART; SM00292; BRCT; 4.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF52113; BRCT domain; 3.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS50172; BRCT; 3.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000059680};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 11..101
FT /note="BRCT"
FT /evidence="ECO:0000259|PROSITE:PS50172"
FT DOMAIN 114..203
FT /note="BRCT"
FT /evidence="ECO:0000259|PROSITE:PS50172"
FT DOMAIN 1143..1225
FT /note="BRCT"
FT /evidence="ECO:0000259|PROSITE:PS50172"
FT DOMAIN 1385..1441
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 482..502
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 553..639
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 773..796
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 824..843
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 920..939
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1076..1101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1442..1462
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 556..609
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1076..1090
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1462 AA; 158495 MW; 573AE5701F8CE1D1 CRC64;
MASPISGSDD DDEHLFAGVR FFLVGFDPLS ESQYRSEMVR RSGVDAGRFG SGCTHVIVCG
LVYDDPACVA ARAEGKKVVT ELWVEASLDR GMLADADRVM YWPVRDLNGI AGSESLRICL
TGYQRSDRED IMSMVSLMGA QFSKSLNPDV VTHLICYKFE GEKYEAAKKA KLKFNFNIKL
VNHRWLEDCL KCWKILPVDD YSKSSWELEI MEAQAKDSED EEDVGQRSFR NKIVRSTLNP
KGSAGTSANP VVNAPIRSPT ISSGNIGMVL EKQPNIPGEI RKAEDAVNRI HDVAVQGTPR
TRLAMSANTD FSTPSQIPFI HSDSRGDAAV RDLKNADQIQ GNKHKDVGTK TLDVTSGASG
TPCSSKMVVS ANHNVHSLNK TNFVEDHGDT DASKADLTTP SREILPANVL DSSNVARGRS
QEDYGATCTP DAAAGQSTIN DNVTNNNIGL KSGNNASLNI NNKSSLKPLE KSVLPEQYSA
NRIGPLQGAD GSMMRSDSSI STARKGDKII ADLAGVQVLK GGENIQDENV LDGAYSQKKK
CSISPVLFKV QNGDTGKETG ALNSPSANRL SDTSEPAIWS SVGTNPSEAN NVDLGKQQSG
SSKSRSRTAL KHGNLVDGIK LPEYSSSETN AQPPPKPKEL LATSLSATVH DVKRCPDFSF
QNKDGDYAQD SGNALNQDGS PLMRKTENVL AKVRTSDISL HSSRKSKLVP SSGNGDTEMS
DALDIEKNKA AVASNCKPEK VVPDENIKAD QLKDFPGTSN NVLRQTGYLK KVASRKGMKA
STKRPRSASK VVDEPVVDDG KTKTVVSESE PDKMIAHKHI GETAKDGPDS VNAAEHRTNS
SDKVLTDGAS RISRRLQNVH TMKNDRHAAS NLESSKMISE ENTGIGITPK KFVSNATTEG
HQTNSPKMLP NTSMRNTFAK RSRVSDTKMT GESSADKTET VAGKSLFDDL FPSQNIDHPK
KLSSSASADG CGSLSCKNAS PARVRNAVAK RKIKALEDKS DSKLGKIGGA IVSAAKAVAS
RGIEESSCNI NKVSSDQNSV KTDGMRDVSG LFSSDTSVID RSENLNNSKL RCSKRNKSLS
LDHEKENMQD NGTLSSKSNG RTAIMNSNLD ANSMKHGANM FNEPNRIKGN GPGTLITPEP
TCFILSGHRQ QRKDYRSILR CLKARVCRDS HHWSYQATHF IAPDPLKRTE KFFAAAAAGK
WILKTDYLTS CNEVGKLLDE EPFEWSGTGL NDGETISFEA PKKWRVLRQQ MGHGAFYGMQ
IIVYGQLVSP SLDTVKRAVR SGDGTILATS PPYTRFLNSG VDFAVVSSAM PSADAWVQQF
ISHDIPCITA DYLVEYVCKH GHPLDRHVLF NTNDLANKSL KKLLQNQQEV ATDVLKPQED
GDPDDLSCSA CGSTDRGEVM LICGNEDGST GCGVGMHIDC CDPPLEAVPE HDWLCPQCEM
PKATKKSASR VASKSRVSKR KR
//
