ID   Q116K5_TRIEI            Unreviewed;       496 AA.
AC   Q116K5;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   24-JAN-2024, entry version 101.
DE   SubName: Full=RNA polymerase, sigma 28 subunit {ECO:0000313|EMBL:ABG50569.1};
GN   OrderedLocusNames=Tery_1214 {ECO:0000313|EMBL:ABG50569.1};
OS   Trichodesmium erythraeum (strain IMS101).
OC   Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae;
OC   Oscillatoriales; Microcoleaceae; Trichodesmium.
OX   NCBI_TaxID=203124 {ECO:0000313|EMBL:ABG50569.1};
RN   [1] {ECO:0000313|EMBL:ABG50569.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IMS101 {ECO:0000313|EMBL:ABG50569.1};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Kiss H., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P.,
RA   Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA   Richardson P.;
RT   "Complete sequence of Trichodesmium erythraeum IMS101.";
RL   Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000393; ABG50569.1; -; Genomic_DNA.
DR   AlphaFoldDB; Q116K5; -.
DR   STRING; 203124.Tery_1214; -.
DR   KEGG; ter:Tery_1214; -.
DR   eggNOG; COG0568; Bacteria.
DR   HOGENOM; CLU_549729_0_0_3; -.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   CDD; cd06171; Sigma70_r4; 1.
DR   Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007624; RNA_pol_sigma70_r3.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR   PANTHER; PTHR30603:SF62; RNA POLYMERASE SIGMA FACTOR SIGA; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04539; Sigma70_r3; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR   PROSITE; PS00716; SIGMA70_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          456..482
FT                   /note="RNA polymerase sigma-70"
FT                   /evidence="ECO:0000259|PROSITE:PS00716"
SQ   SEQUENCE   496 AA;  58649 MW;  6C6557B792FD76FF CRC64;
     MIMIGHTLEL DDLKKISSPK KIVALFEKLG FNFQIEHLDI EQLELPSYCR ETIDNTYKIY
     NPNQEELQVF LLELRQEKFK TNYKEQERII TISQGILRNK NNFLLIATKK YNKLIIVAPH
     RRENQNIKIS IKWWLIDCQN PNYYDTYWLE NVAINNCEPT EELTNKHNSE GSYDPDIEPP
     TGTFTEDSIQ LYYKQVNSFA RLHPEEEIHL AHQIDGLLAL EKIYEKLEEK LNRSPNEIEW
     ATEAKMSKWE LCDRLEQGRR AKNQMVTANL RLVTSVAKRY QNRGLDFQDL IQEGVIGLLR
     ATEKFDHTKG YKFSTYGIWW IRQAITRAIC DYSRIVRLPV YLYETISQIK KIVKQISIEC
     SPLTAEEVAT RMEMTTEKLQ FIIECAQETL SLDYPINKGE NIIYKEMIKF NGETPTKYVF
     ENCLQEDVES VLKTLTERER NVLQMRFGLD DGQEKTLKEI GDTFNLTRER IRQIEAKALR
     KLEDPKRNHI LREYIH
//