ID Q12S54_SHEDO Unreviewed; 532 AA.
AC Q12S54;
DT 22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT 22-AUG-2006, sequence version 1.
DT 27-MAR-2024, entry version 92.
DE SubName: Full=GGDEF domain {ECO:0000313|EMBL:ABE53722.1};
GN OrderedLocusNames=Sden_0430 {ECO:0000313|EMBL:ABE53722.1};
OS Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=318161 {ECO:0000313|EMBL:ABE53722.1, ECO:0000313|Proteomes:UP000001982};
RN [1] {ECO:0000313|EMBL:ABE53722.1, ECO:0000313|Proteomes:UP000001982}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OS217 / ATCC BAA-1090 / DSM 15013
RC {ECO:0000313|Proteomes:UP000001982};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P.;
RT "Complete sequence of Shewanella denitrificans OS217.";
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000302; ABE53722.1; -; Genomic_DNA.
DR RefSeq; WP_011494888.1; NC_007954.1.
DR AlphaFoldDB; Q12S54; -.
DR STRING; 318161.Sden_0430; -.
DR KEGG; sdn:Sden_0430; -.
DR eggNOG; COG2199; Bacteria.
DR HOGENOM; CLU_038372_1_0_6; -.
DR OrthoDB; 5905478at2; -.
DR Proteomes; UP000001982; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 6.10.340.10; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR003660; HAMP_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR46663; DIGUANYLATE CYCLASE DGCT-RELATED; 1.
DR PANTHER; PTHR46663:SF2; GGDEF DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50885; HAMP; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000001982};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..30
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 147..168
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 166..220
FT /note="HAMP"
FT /evidence="ECO:0000259|PROSITE:PS50885"
FT DOMAIN 385..521
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 532 AA; 59883 MW; C7BA7733DAF0BD59 CRC64;
MNKSGLVIRL AIVIIFTAVI VGLITTQIFY RFTFLNEQVL GQQSIHQLSN TVSKTASIAS
YLGDEELARE VVNGLISNDV ITSAAIKTDT LVVKSDNFPD ADASIDTLEF ALYSPFQKDR
RVGLLIVEAN DDYLRVKANN ISATNTFFVG IEALIITIIS ILVTYYVITR PILNIGKALH
SISPGTSERI AKPLSHQKSE IGQLADDVNE LLAKAEQQLL KEKSLRSEVE VLESRFRMLF
ENATSAIALV EPKGDLLLYN ETFETLIQKL QLPLKKNYGN YLQDLFIMKK ELHEQIQIAF
ENNESAMAEL ELISPQDEKI WMQVVVTPLV TDDFQENYQI TLHDISKRKY QISLLDKKAN
FDSLTNLFNR HAAEQHLRQL MANREPFALI MMDLNDFKPI NDIFGHDAGD ELLIHVSSQL
LKSVRKADIL ARWGGDEFVL ILPKASREDV INVCAKSAAK LSKPHNLSQH DKSVFVTASM
GVSFYPDDQV ELLELIRSAD KAMYQAKKQK TINNELYLSF TSDKANLVSG KK
//
