ID Q16E45_ROSDO Unreviewed; 364 AA.
AC Q16E45;
DT 25-JUL-2006, integrated into UniProtKB/TrEMBL.
DT 25-JUL-2006, sequence version 1.
DT 27-MAR-2024, entry version 112.
DE SubName: Full=Transcriptional regulator, AraC family, putative {ECO:0000313|EMBL:ABG29748.1};
GN Name=araC {ECO:0000313|EMBL:ABG29748.1};
GN OrderedLocusNames=RD1_0008 {ECO:0000313|EMBL:ABG29748.1};
OS Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp.
OS (strain OCh 114)) (Roseobacter denitrificans).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Roseobacter.
OX NCBI_TaxID=375451 {ECO:0000313|EMBL:ABG29748.1, ECO:0000313|Proteomes:UP000007029};
RN [1] {ECO:0000313|EMBL:ABG29748.1, ECO:0000313|Proteomes:UP000007029}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33942 / OCh 114 {ECO:0000313|Proteomes:UP000007029};
RX PubMed=17098896; DOI=10.1128/JB.01390-06;
RA Swingley W.D., Sadekar S., Mastrian S.D., Matthies H.J., Hao J., Ramos H.,
RA Acharya C.R., Conrad A.L., Taylor H.L., Dejesa L.C., Shah M.K.,
RA O'huallachain M.E., Lince M.T., Blankenship R.E., Beatty J.T.,
RA Touchman J.W.;
RT "The complete genome sequence of Roseobacter denitrificans reveals a
RT mixotrophic rather than photosynthetic metabolism.";
RL J. Bacteriol. 189:683-690(2007).
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DR EMBL; CP000362; ABG29748.1; -; Genomic_DNA.
DR AlphaFoldDB; Q16E45; -.
DR STRING; 375451.RD1_0008; -.
DR KEGG; rde:RD1_0008; -.
DR eggNOG; COG4977; Bacteria.
DR HOGENOM; CLU_000445_59_0_5; -.
DR Proteomes; UP000007029; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd03136; GATase1_AraC_ArgR_like; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR46796:SF2; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS; 1.
DR PANTHER; PTHR46796; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF52317; Class I glutamine amidotransferase-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000007029};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 251..349
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 364 AA; 39695 MW; FAD8C0D0D680B622 CRC64;
MQHTRLATKG KRFSTYCKKI LLRLKNVLHM TRSTTSPRSI GFLLFPGFPM ACLTSVIEPL
RAANEISGAT AFTWELIAEQ PGPVASSAGI PFGPQSLLAD VDAPDYLLLL SAPSVRFADQ
RTPAHLRRLA RHGCTLGAIS GGVFPLVRSG AVEGARLSVH WCYEAAFAAE FPDMLQSDEV
IETSDRCVTA SGAAAAFDLA LGFIDTALGP NVATEVACWF QHPMMRKIGV KQSVPAHLTD
SIQNDLSPLV SDAIRIFAED LSNPVSVAGV AKALNVSPRH LERSFKKAAG QNPTTYFRWL
RMQAARQIVL YTNDAISDVA AAVGYASTKH FIRHYRAEYG LSPQEDRKRI NLYRTEGNRP
VPSV
//
