ID Q1AVD4_RUBXD Unreviewed; 329 AA.
AC Q1AVD4;
DT 11-JUL-2006, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2006, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE RecName: Full=Autoinducer 2 import system permease protein LsrC {ECO:0000256|ARBA:ARBA00039382};
GN OrderedLocusNames=Rxyl_1683 {ECO:0000313|EMBL:ABG04644.1};
OS Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1).
OC Bacteria; Actinomycetota; Rubrobacteria; Rubrobacterales; Rubrobacteraceae;
OC Rubrobacter.
OX NCBI_TaxID=266117 {ECO:0000313|EMBL:ABG04644.1, ECO:0000313|Proteomes:UP000006637};
RN [1] {ECO:0000313|EMBL:ABG04644.1, ECO:0000313|Proteomes:UP000006637}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 9941 / NBRC 16129 / PRD-1
RC {ECO:0000313|Proteomes:UP000006637};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., da Costa M.S.,
RA Rainey F.A., Empadinhas N., Jolivet E., Battista J.R., Richardson P.;
RT "Complete sequence of Rubrobacter xylanophilus DSM 9941.";
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Part of the ABC transporter complex LsrABCD involved in
CC autoinducer 2 (AI-2) import. Probably responsible for the translocation
CC of the substrate across the membrane. {ECO:0000256|ARBA:ARBA00025439}.
CC -!- SUBUNIT: The complex is composed of two ATP-binding proteins (LsrA),
CC two transmembrane proteins (LsrC and LsrD) and a solute-binding protein
CC (LsrB). {ECO:0000256|ARBA:ARBA00011262}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CP000386; ABG04644.1; -; Genomic_DNA.
DR RefSeq; WP_011564661.1; NC_008148.1.
DR AlphaFoldDB; Q1AVD4; -.
DR STRING; 266117.Rxyl_1683; -.
DR KEGG; rxy:Rxyl_1683; -.
DR eggNOG; COG1172; Bacteria.
DR HOGENOM; CLU_028880_0_1_11; -.
DR OrthoDB; 9808136at2; -.
DR PhylomeDB; Q1AVD4; -.
DR Proteomes; UP000006637; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR CDD; cd06579; TM_PBP1_transp_AraH_like; 1.
DR InterPro; IPR001851; ABC_transp_permease.
DR PANTHER; PTHR32196; ABC TRANSPORTER PERMEASE PROTEIN YPHD-RELATED-RELATED; 1.
DR PANTHER; PTHR32196:SF29; AUTOINDUCER 2 IMPORT SYSTEM PERMEASE PROTEIN LSRC; 1.
DR Pfam; PF02653; BPD_transp_2; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000006637};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 25..46
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 53..73
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 79..98
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 105..123
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 129..152
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 164..187
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 222..241
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 277..296
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 329 AA; 33041 MW; 8D4A807E4E18DCAA CRC64;
MSGAAAAAGE GRAGLLRRFL ARPEAPALVF LAVLVAVFSA VADGFLRASN LEGILAQVAV
VGVIALAVNQ VILAGEIDIS MGSMLGLCAI VAGTVAVATG KLLPTLLAGV AVGAAAGAVN
GLLVTLGRIP AIIVTLGMLY ALRGVILLIT GGDWITGIPR EARVLGLGSL FGVGAPVLVL
FACYVLMELV HRHSGWGRDV LAVGGNRSAA RLAGIPVDRV RFWAFVLVGV AVGIASVIYI
GRAGSVQTNT GAGLELRVIA AVVIGGTSIA GGRGSPLAAL TGAVLIGVIL NGLVLLDVPG
VWQDAVLGSL ILLAVATDVL RRRLIGEKT
//
