ID Q1IM47_KORVE Unreviewed; 359 AA.
AC Q1IM47;
DT 13-JUN-2006, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2006, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE SubName: Full=Tetratricopeptide repeat protein {ECO:0000313|EMBL:ABF42053.1};
GN OrderedLocusNames=Acid345_3052 {ECO:0000313|EMBL:ABF42053.1};
OS Koribacter versatilis (strain Ellin345).
OC Bacteria; Acidobacteriota; Terriglobia; Terriglobales; Acidobacteriaceae;
OC Koribacter.
OX NCBI_TaxID=204669 {ECO:0000313|EMBL:ABF42053.1, ECO:0000313|Proteomes:UP000002432};
RN [1] {ECO:0000313|EMBL:ABF42053.1, ECO:0000313|Proteomes:UP000002432}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ellin345 {ECO:0000313|EMBL:ABF42053.1,
RC ECO:0000313|Proteomes:UP000002432};
RX PubMed=19201974; DOI=10.1128/AEM.02294-08;
RA Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M.,
RA Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B.,
RA Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C.,
RA Davidsen T.M., DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S.,
RA Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P.,
RA Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q.,
RA Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R.,
RA Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R.;
RT "Three genomes from the phylum Acidobacteria provide insight into the
RT lifestyles of these microorganisms in soils.";
RL Appl. Environ. Microbiol. 75:2046-2056(2009).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP000360; ABF42053.1; -; Genomic_DNA.
DR RefSeq; WP_011523854.1; NC_008009.1.
DR AlphaFoldDB; Q1IM47; -.
DR STRING; 204669.Acid345_3052; -.
DR EnsemblBacteria; ABF42053; ABF42053; Acid345_3052.
DR KEGG; aba:Acid345_3052; -.
DR eggNOG; COG4235; Bacteria.
DR eggNOG; COG4259; Bacteria.
DR HOGENOM; CLU_068881_0_0_0; -.
DR OrthoDB; 108535at2; -.
DR Proteomes; UP000002432; Chromosome.
DR GO; GO:0055087; C:Ski complex; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR039226; Ski3/TTC37.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR15704; SUPERKILLER 3 PROTEIN-RELATED; 1.
DR PANTHER; PTHR15704:SF7; TETRATRICOPEPTIDE REPEAT PROTEIN 37; 1.
DR Pfam; PF14559; TPR_19; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002432};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}; Signal {ECO:0000256|SAM:SignalP};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..359
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004190913"
FT REPEAT 54..87
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
SQ SEQUENCE 359 AA; 39153 MW; 9D8FBFD31D3D9914 CRC64;
MKCRFAALGA LLFLNFASSA FALDKTAEDL MNAGHYKRAR AIAQQRLQKN ANDADALYIL
ARVSLAQDRL DQAQSYSERA IEIAPNMSEA HRVLGESLGL KAIKLNLVTG LAIARRGKKE
GELALQLDPR SIDAAEFLAS YYNAAPAVAG GGHDKAEHMV ETIMQLNPGR SYLARATGAE
EKKDVAGEEQ WLLKAAQVDP KNYEVQDRLA HLYIGSDRHD LGRAAKYARA ALALDAGRSG
SYAVLAAIYA EQNRWADLDA MLSLAERADG DDLVPYFEAG KALVATGKDN ARAERYLKKY
LAQEAEGGQP HQGHAHWQLG LLMLREGKKE VALAELQTSV SLLPDFRPAA DDLKRARAS
//
