ID Q2A0S1_9LAMI Unreviewed; 612 AA.
AC Q2A0S1;
DT 04-APR-2006, integrated into UniProtKB/TrEMBL.
DT 04-APR-2006, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=Phytochrome A {ECO:0000313|EMBL:CAJ80974.1};
DE Flags: Fragment;
GN Name=phya {ECO:0000313|EMBL:CAJ80974.1};
OS Schwalbea americana.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Orobanchaceae; Rhinantheae; Schwalbea.
OX NCBI_TaxID=86091 {ECO:0000313|EMBL:CAJ80974.1};
RN [1] {ECO:0000313|EMBL:CAJ80974.1}
RP NUCLEOTIDE SEQUENCE.
RX AGRICOLA=IND43820103;
RA Bennett J.R., Mathews S.;
RT "Phylogeny of the parasitic plant family Orobanchaceae inferred from
RT phytochrome A.";
RL Am. J. Bot. 93:1039-1051(2006).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; AM234017; CAJ80974.1; -; Genomic_DNA.
DR AlphaFoldDB; Q2A0S1; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013654; PAS_2.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF08446; PAS_2; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 56..231
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 458..528
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CAJ80974.1"
FT NON_TER 612
FT /evidence="ECO:0000313|EMBL:CAJ80974.1"
SQ SEQUENCE 612 AA; 68126 MW; F61F34024CE1EDA9 CRC64;
SGKPFYAIIH RVTGSLIIDF EPVKPHEVPM TAAGALQSYK LAAKAITRLQ ALPSGSLERL
CDTMAQEVFE LTGYDRVMVY RFHDDDHGEV FTEITKPGLE PYAGLHYPAT DIPQAARFLF
MKNKVRMICD CRLNHVKVVQ DGNLGFDLTL CGSTLRAPHS CHVQYMENMN SIASLVMSVV
VNEGEEESSG PGLDTSQLDK RKRLWGLVVC HNTSPRFVPF PLRYACEFLA QVFAIHVSKE
LELENQMLEK NILRTQTLLC DMLLRDAPLG IVTQSPNVMD LVKCDGALLL HKGIKYRLGL
TPTDFQLRDL VSWLDEYHRD STGLSSDSLY DGGFPGALAL GDAICGMAAV RITDKEWLFW
FRSHTAAEIR WGGAKHESAE KDDGRKMHPR SSFKAFLEVV KTRSLPWKDY EMDAIHSLQL
ILRNTSLKEA DDKDLGGREI QEKLGELQID GMHELEAVTS EMVRLIETAS VPIFAVGVDG
LVNGWNTKIA DLTGLHVDEA IGKHFLGLVE ETSADAVSKM LESALEGKEE QNVHFEIKTH
GLRSESGPIS LIVNACASRD VKDSVVGVCF IAHDITAQKS VMDKFTRIEG DYRAIIQNPN
PLIPPIFGTD EF
//
