ID Q2JT53_SYNJA Unreviewed; 180 AA.
AC Q2JT53;
DT 07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT 07-MAR-2006, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE SubName: Full=Putative transposase, truncation {ECO:0000313|EMBL:ABD00154.1};
GN OrderedLocusNames=CYA_2012 {ECO:0000313|EMBL:ABD00154.1};
OS Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium Yellowstone
OS A-Prime).
OC Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae;
OC Synechococcus.
OX NCBI_TaxID=321327 {ECO:0000313|EMBL:ABD00154.1, ECO:0000313|Proteomes:UP000008818};
RN [1] {ECO:0000313|EMBL:ABD00154.1, ECO:0000313|Proteomes:UP000008818}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-3-3Ab {ECO:0000313|EMBL:ABD00154.1,
RC ECO:0000313|Proteomes:UP000008818};
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
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DR EMBL; CP000239; ABD00154.1; -; Genomic_DNA.
DR AlphaFoldDB; Q2JT53; -.
DR KEGG; cya:CYA_2012; -.
DR eggNOG; COG0675; Bacteria.
DR HOGENOM; CLU_032903_9_0_3; -.
DR Proteomes; UP000008818; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 2..63
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 75..142
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 180 AA; 19880 MW; F91086070793CB0D CRC64;
MQRAVSRKKK GSNRYKKAVK RLSKAHQKVA NQRKDFHYKT AKELLSRGKH IAHEALTIGG
LARTRLAKSI YDAGWGQFLQ ILKVKAERAG LLTIAVNPNG TSQECSGCGQ VVPKKLHERW
HDCPYCGLRL SRDHNSARVI KSRAVGHPVL KARKTSYAVA GVTEKPALYP FASAARSALG
//
