ID Q2KAK9_RHIEC Unreviewed; 413 AA.
AC Q2KAK9;
DT 07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT 07-MAR-2006, sequence version 1.
DT 27-MAR-2024, entry version 120.
DE SubName: Full=RNA polymerase sigma factor protein (Sigma-70) {ECO:0000313|EMBL:ABC90127.1};
GN OrderedLocusNames=RHE_CH01322 {ECO:0000313|EMBL:ABC90127.1};
OS Rhizobium etli (strain CFN 42 / ATCC 51251).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
OX NCBI_TaxID=347834 {ECO:0000313|EMBL:ABC90127.1, ECO:0000313|Proteomes:UP000001936};
RN [1] {ECO:0000313|EMBL:ABC90127.1, ECO:0000313|Proteomes:UP000001936}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CFN 42 / ATCC 51251 {ECO:0000313|Proteomes:UP000001936};
RX PubMed=16505379; DOI=10.1073/pnas.0508502103;
RA Gonzalez V., Santamaria R.I., Bustos P., Hernandez-Gonzalez I.,
RA Medrano-Soto A., Moreno-Hagelsieb G., Janga S.C., Ramirez M.A.,
RA Jimenez-Jacinto V., Collado-Vides J., Davila G.;
RT "The partitioned Rhizobium etli genome: genetic and metabolic redundancy in
RT seven interacting replicons.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:3834-3839(2006).
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DR EMBL; CP000133; ABC90127.1; -; Genomic_DNA.
DR RefSeq; WP_011424661.1; NC_007761.1.
DR AlphaFoldDB; Q2KAK9; -.
DR KEGG; ret:RHE_CH01322; -.
DR eggNOG; COG4941; Bacteria.
DR HOGENOM; CLU_035311_1_0_5; -.
DR OrthoDB; 9780299at2; -.
DR Proteomes; UP000001936; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR046531; DUF6596.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR47756:SF2; BLL6612 PROTEIN; 1.
DR PANTHER; PTHR47756; BLL6612 PROTEIN-RELATED; 1.
DR Pfam; PF20239; DUF6596; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001936}.
FT DOMAIN 9..75
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 109..159
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT DOMAIN 178..278
FT /note="DUF6596"
FT /evidence="ECO:0000259|Pfam:PF20239"
SQ SEQUENCE 413 AA; 45803 MW; D5E726205EB6ED78 CRC64;
MERVIEEIYR TQSRRVLATL IRLLGDFDRA EEALHDAFAA AARTWPVEGL PGNPSAWLVS
TGRFKAIDTI RRRARFDASQ HHIEDSLYTV DTTEIGDMEP IEDDMLRLIF TCCHPAIPSD
AQTAMALREI CGLTTEEIAH AFLVPAPTVA QRIVRAKNRI RAANIPYEVP GRDALPQRLD
QVLHVIYLVF NEGYSASSGE DVVRADLTAE AIRLARLLLA LLPHPDARGL LALMLLQDSR
RLARSNEQGS LVLLADQDRS LWDRAKIAEG LALLAEAMRA AEIGAYTVQA AIAAEHARAP
TAEETDWQRI AFYYDLLLAA QPSPIVELNR AVAIAMADGP AKGLDLIDAI LGRQELTAYH
LAHSARADFL RRLGRTEEAI AAYQTALSLC RQEPEQAFLR KWISELAAAP ERQ
//
