ID Q2TLZ9_BYMV Unreviewed; 485 AA.
AC Q2TLZ9;
DT 24-JAN-2006, integrated into UniProtKB/TrEMBL.
DT 24-JAN-2006, sequence version 1.
DT 27-MAR-2024, entry version 76.
DE RecName: Full=Genome polyprotein {ECO:0000256|ARBA:ARBA00020107};
DE Flags: Fragment;
OS Bean yellow mosaic virus.
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC Patatavirales; Potyviridae; Potyvirus.
OX NCBI_TaxID=12197 {ECO:0000313|EMBL:AAX54481.1};
OH NCBI_TaxID=3818; Arachis hypogaea (Peanut).
OH NCBI_TaxID=4627; Canna.
OH NCBI_TaxID=3828; Crotalaria.
OH NCBI_TaxID=52517; Eustoma.
OH NCBI_TaxID=58987; Freesia.
OH NCBI_TaxID=49747; Gladiolus.
OH NCBI_TaxID=3847; Glycine max (Soybean) (Glycine hispida).
OH NCBI_TaxID=3873; Lupinus luteus (European yellow lupine).
OH NCBI_TaxID=3879; Medicago sativa (Alfalfa).
OH NCBI_TaxID=3469; Papaver somniferum (Opium poppy).
OH NCBI_TaxID=3885; Phaseolus vulgaris (Kidney bean) (French bean).
OH NCBI_TaxID=3888; Pisum sativum (Garden pea) (Lathyrus oleraceus).
OH NCBI_TaxID=35938; Robinia pseudoacacia (Black locust).
OH NCBI_TaxID=74517; Trifolium hybridum (Alsike clover).
OH NCBI_TaxID=60916; Trifolium incarnatum (Crimson clover).
OH NCBI_TaxID=57577; Trifolium pratense (Red clover).
OH NCBI_TaxID=3899; Trifolium repens (Creeping white clover).
OH NCBI_TaxID=3900; Trifolium subterraneum (Subterranean clover).
OH NCBI_TaxID=97047; Trifolium vesiculosum.
OH NCBI_TaxID=78534; Trigonella foenum-graecum (Fenugreek).
OH NCBI_TaxID=3906; Vicia faba (Broad bean) (Faba vulgaris).
OH NCBI_TaxID=3908; Vicia sativa (Spring vetch) (Tare).
RN [1] {ECO:0000313|EMBL:AAX54481.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=VM-23 {ECO:0000313|EMBL:AAX54481.1};
RC TISSUE=Infected leaf {ECO:0000313|EMBL:AAX54481.1};
RA Smitha R., Krishna Reddy M.;
RT "Molecular characterization of Bean yellow mosaic virus from Vanilla
RT fragrans.";
RL Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in aphid transmission, cell-to-cell and systemis
CC movement, encapsidation of the viral RNA and in the regulation of viral
CC RNA amplification. {ECO:0000256|ARBA:ARBA00029405}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000256|ARBA:ARBA00004328}.
CC -!- SIMILARITY: Belongs to the potyviridae genome polyprotein family.
CC {ECO:0000256|ARBA:ARBA00006064, ECO:0000256|RuleBase:RU003351}.
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DR EMBL; AY845012; AAX54481.1; -; Genomic_RNA.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001592; Poty_coat.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001205; RNA-dir_pol_C.
DR InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR Pfam; PF00767; Poty_coat; 1.
DR Pfam; PF00680; RdRP_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE 3: Inferred from homology;
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Viral RNA replication {ECO:0000256|ARBA:ARBA00022953};
KW Virion {ECO:0000256|ARBA:ARBA00022844}.
FT DOMAIN 1..59
FT /note="RdRp catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50507"
FT REGION 218..253
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 218..236
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 237..253
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AAX54481.1"
SQ SEQUENCE 485 AA; 54924 MW; 2C01B4A8A6F70549 CRC64;
GNNSGQPSTV VDNTLMVIMA VYYAAEKLGI KGNLEDTLVF FANGDDLLIA IKPECESYLD
KFEGLFSELG LKYDFSSRTK DKGDLWFMSH RGIQIDGMWI PKLEEERIVS ILEWDRAIQP
EHRLEAICAA MIEAWGYPTL LNHIRKFYLW VLGQAPYSQL SAEGKAPYIS EVALKHLYTE
EKVTPAELER YNIALNDCFE SESDEVLTCR FQSEQEKLNA GENKKDKGRK IGDNPSEESE
GQSSRQILPD RDVNTGTVGT FSIPRLKKIA GKLNIPKIGG KVVLNLDPLL DYNPPQDDIS
NTIATQAQFE AWYTGVKQAY EVDDSQMGII LNGLMVWCIE NGTSEYLQGE WTMMDGEEQV
TYPLKPILDN AKPTFRQIMS HFSQVAEAYI EKRNATEGYM PRYGLQRNLT DYGLARYAFD
FYRLTSKTPV RAREAHMQMK AAAVRGKLNR LFGLDGNVGT DEENTERHTA GDVNRDMHTM
LGVRI
//
