ID Q3J997_NITOC Unreviewed; 479 AA.
AC Q3J997;
DT 08-NOV-2005, integrated into UniProtKB/TrEMBL.
DT 08-NOV-2005, sequence version 1.
DT 27-MAR-2024, entry version 103.
DE SubName: Full=Peptidase S1C, Do {ECO:0000313|EMBL:ABA58599.1};
GN OrderedLocusNames=Noc_2139 {ECO:0000313|EMBL:ABA58599.1};
OS Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB
OS 11848 / C-107).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC Nitrosococcus.
OX NCBI_TaxID=323261 {ECO:0000313|EMBL:ABA58599.1, ECO:0000313|Proteomes:UP000006838};
RN [1] {ECO:0000313|Proteomes:UP000006838}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107
RC {ECO:0000313|Proteomes:UP000006838};
RX PubMed=16957257; DOI=10.1128/AEM.00463-06;
RA Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J.,
RA Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T.,
RA Vergez L.M., Ward B.B.;
RT "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-
RT oxidizing bacterium Nitrosococcus oceani ATCC 19707.";
RL Appl. Environ. Microbiol. 72:6299-6315(2006).
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000256|ARBA:ARBA00004418}.
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DR EMBL; CP000127; ABA58599.1; -; Genomic_DNA.
DR RefSeq; WP_011330870.1; NC_007484.1.
DR AlphaFoldDB; Q3J997; -.
DR STRING; 323261.Noc_2139; -.
DR KEGG; noc:Noc_2139; -.
DR eggNOG; COG0265; Bacteria.
DR HOGENOM; CLU_020120_1_0_6; -.
DR InParanoid; Q3J997; -.
DR Proteomes; UP000006838; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd00987; PDZ_serine_protease; 2.
DR Gene3D; 2.30.42.10; -; 2.
DR Gene3D; 2.40.10.120; -; 1.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR041489; PDZ_6.
DR InterPro; IPR036034; PDZ_sf.
DR InterPro; IPR011782; Pept_S1C_Do.
DR InterPro; IPR009003; Peptidase_S1_PA.
DR InterPro; IPR001940; Peptidase_S1C.
DR NCBIfam; TIGR02037; degP_htrA_DO; 1.
DR PANTHER; PTHR22939; SERINE PROTEASE FAMILY S1C HTRA-RELATED; 1.
DR PANTHER; PTHR22939:SF129; SERINE PROTEASE HTRA2, MITOCHONDRIAL; 1.
DR Pfam; PF13180; PDZ_2; 1.
DR Pfam; PF17820; PDZ_6; 1.
DR Pfam; PF13365; Trypsin_2; 1.
DR PRINTS; PR00834; PROTEASES2C.
DR SMART; SM00228; PDZ; 2.
DR SUPFAM; SSF50156; PDZ domain-like; 2.
DR SUPFAM; SSF50494; Trypsin-like serine proteases; 1.
DR PROSITE; PS50106; PDZ; 2.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Protease {ECO:0000256|ARBA:ARBA00022670};
KW Reference proteome {ECO:0000313|Proteomes:UP000006838};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..21
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 22..479
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5038520687"
FT DOMAIN 270..361
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 376..443
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT ACT_SITE 122
FT /note="Charge relay system"
FT /evidence="ECO:0000256|PIRSR:PIRSR611782-1"
FT ACT_SITE 152
FT /note="Charge relay system"
FT /evidence="ECO:0000256|PIRSR:PIRSR611782-1"
FT ACT_SITE 226
FT /note="Charge relay system"
FT /evidence="ECO:0000256|PIRSR:PIRSR611782-1"
SQ SEQUENCE 479 AA; 51635 MW; 254F6A91CE8F4A24 CRC64;
MHRYRMILLL LAALFALPAQ ALEEGGVESL RQTGKAFAAV AREVSPSVVF IQVESIREER
GSRAFPPPFG DEFFRRFFGE PFSPRGEAPK GQRRAIGQGS GFIFSSKKGL LSDKTYILTN
SHVVEDADKI RVQFQDDREF EGEIVGTDPK SDIAVIEITV GGLPALEWGD SSKLQVGEWV
IAMGNPFGLS HTLTVGVVSA TGRTSLGISD YEDFIQTDAA INPGNSGGPL VNLNGEVVGV
NTAIFSRSGG YMGIGFAIPS KLAKAIANQL IETGEVTRGY LGIVIQPLTA ELAESFNMEQ
SQGILVAQVS EDSPAKKAGL KQGDVIVGYQ DKPVKDIGGF RNRVALTAPG SRETLTIIRD
GKRQKVKITI GELSQEQTLA EGPTQSAEEL GLAVQTLTPE LARQFDAKAG EGVVVTGVER
GSIAAMAGIR VGNVILQINR KPIHSAKEFN RAMQESQDDK RALLLIRSGN MQHYVVLRW
//
