ID Q3JE44_NITOC Unreviewed; 696 AA.
AC Q3JE44;
DT 08-NOV-2005, integrated into UniProtKB/TrEMBL.
DT 08-NOV-2005, sequence version 1.
DT 27-MAR-2024, entry version 111.
DE SubName: Full=Response regulator receiver modulated diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABA56902.1};
GN OrderedLocusNames=Noc_0376 {ECO:0000313|EMBL:ABA56902.1};
OS Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB
OS 11848 / C-107).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC Nitrosococcus.
OX NCBI_TaxID=323261 {ECO:0000313|EMBL:ABA56902.1, ECO:0000313|Proteomes:UP000006838};
RN [1] {ECO:0000313|Proteomes:UP000006838}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107
RC {ECO:0000313|Proteomes:UP000006838};
RX PubMed=16957257; DOI=10.1128/AEM.00463-06;
RA Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J.,
RA Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T.,
RA Vergez L.M., Ward B.B.;
RT "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-
RT oxidizing bacterium Nitrosococcus oceani ATCC 19707.";
RL Appl. Environ. Microbiol. 72:6299-6315(2006).
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00169}.
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DR EMBL; CP000127; ABA56902.1; -; Genomic_DNA.
DR RefSeq; WP_002812942.1; NC_007484.1.
DR AlphaFoldDB; Q3JE44; -.
DR STRING; 323261.Noc_0376; -.
DR KEGG; noc:Noc_0376; -.
DR eggNOG; COG0784; Bacteria.
DR eggNOG; COG2199; Bacteria.
DR eggNOG; COG2200; Bacteria.
DR HOGENOM; CLU_000445_70_50_6; -.
DR InParanoid; Q3JE44; -.
DR Proteomes; UP000006838; Chromosome.
DR GO; GO:0000160; P:phosphorelay signal transduction system; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR CDD; cd00156; REC; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR011006; CheY-like_superfamily.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF82; FIMX; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00989; PAS; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF52172; CheY-like; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS50110; RESPONSE_REGULATORY; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006838}.
FT DOMAIN 9..126
FT /note="Response regulatory"
FT /evidence="ECO:0000259|PROSITE:PS50110"
FT DOMAIN 144..214
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 300..433
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 444..696
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 696 AA; 79130 MW; 86351F356B2098FA CRC64;
MLSSKNIVRL LIVDASFEDA EMVTNLLRKM GFAARASRVE KEEEFREAIE GQSWDIIVCA
AMLPQFSVAR AAQILLQSEK DISLIIVVDE KTDSDDIDEM YVAGVRDVVL KSRPLRLQSV
IKRELQDLEN RRARRHSEMV LGESERQVRA LLESSRDAVG YVHEGMHIYA NRAYLELFGY
HELDEIEGMP LLDMIAPEEH NRFKAFLKEY GASEGKSAHF TLRAHKADGH TFTAAWEFTP
ASIEGEFCTQ IVIRDKTYDL AAEERIKQVQ QRDILTGFFS RPHYLELMEK WVIAARAGDR
ESSLLYIAID QFNRVRARVG IGASDLVVVD VARILQQYCD EKVILARFGD EVFTLLLPHG
SDEQEDALAE QLRQAVDRHL VEMDERSINV TCSIGICRIG ESAPGGQQIL ERAHKACLKA
QEAGGNRIER YRPVIEDLTD QEKIKQWEVQ LREAMNNKDG FCLFYQPIVS LHGETEEIFE
VLLRMTDDAG GYILPEKFLE PAAQLKLMGE IDRWVIAKAM SVLHSRHQVG QLIRFFVKLS
DPSIHDKNLL PWLKKHLQES GLDARSLIFE ISESSALNYL KRVQQLVEGL RVLGCQFALE
HVGTGLDTSN CLKHINVDYL KIDGAFIENL LQDEQNQEAV KIIIEMAKEA GKPTIAEFVS
DANTLALLWQ FGLDYAQGRY IQEPNQFLSY EFSGGI
//
