ID Q3T3Q7_9HIV1 Unreviewed; 335 AA.
AC Q3T3Q7;
DT 11-OCT-2005, integrated into UniProtKB/TrEMBL.
DT 11-OCT-2005, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=Env polyprotein {ECO:0000256|ARBA:ARBA00029888};
DE Flags: Fragment;
GN Name=env {ECO:0000313|EMBL:AAX97265.1};
OS Human immunodeficiency virus 1.
OC Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
OX NCBI_TaxID=11676 {ECO:0000313|EMBL:AAX97265.1};
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1] {ECO:0000313|EMBL:AAX97265.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=01TZ_HS123.2e22 {ECO:0000313|EMBL:AAX97265.1};
RX PubMed=16140747; DOI=10.1128/JVI.79.18.11693-11704.2005;
RA McCutchan F.E., Hoelscher M., Tovanabutra S., Piyasirisilp S.,
RA Sanders-Buell E., Ramos G., Jagodzinski L., Polonis V., Maboko L.,
RA Mmbando D., Hoffmann O., Riedner G., von Sonnenburg F., Robb M., Birx D.L.;
RT "In-depth analysis of a heterosexually acquired human immunodeficiency
RT virus type 1 superinfection: evolution, temporal fluctuation, and
RT intercompartment dynamics from the seronegative window period through 30
RT months postinfection.";
RL J. Virol. 79:11693-11704(2005).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000256|ARBA:ARBA00004202};
CC Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004202}. Cell
CC membrane {ECO:0000256|ARBA:ARBA00004251}; Single-pass type I membrane
CC protein {ECO:0000256|ARBA:ARBA00004251}. Host cell membrane
CC {ECO:0000256|ARBA:ARBA00004505}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004505}. Host cell membrane
CC {ECO:0000256|ARBA:ARBA00004402}; Single-pass type I membrane protein
CC {ECO:0000256|ARBA:ARBA00004402}. Membrane
CC {ECO:0000256|ARBA:ARBA00004170}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004170}. Membrane
CC {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein
CC {ECO:0000256|ARBA:ARBA00004479}. Virion membrane
CC {ECO:0000256|ARBA:ARBA00004650}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004650}. Virion membrane
CC {ECO:0000256|ARBA:ARBA00004563}; Single-pass type I membrane protein
CC {ECO:0000256|ARBA:ARBA00004563}.
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DR EMBL; AY887323; AAX97265.1; -; Genomic_DNA.
DR GO; GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0019031; C:viral envelope; IEA:UniProtKB-KW.
DR GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR CDD; cd09909; HIV-1-like_HR1-HR2; 1.
DR Gene3D; 1.10.287.210; -; 1.
DR Gene3D; 1.20.5.490; Single helix bin; 1.
DR InterPro; IPR000328; GP41-like.
DR Pfam; PF00517; GP41; 1.
DR SUPFAM; SSF58069; Virus ectodomain; 1.
PE 4: Predicted;
KW Cleavage on pair of basic residues {ECO:0000256|ARBA:ARBA00022685};
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Host cell membrane {ECO:0000256|ARBA:ARBA00022511};
KW Host membrane {ECO:0000256|ARBA:ARBA00022870};
KW Host-virus interaction {ECO:0000256|ARBA:ARBA00022581};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Viral envelope protein {ECO:0000313|EMBL:AAX97265.1};
KW Virion {ECO:0000313|EMBL:AAX97265.1}.
FT TRANSMEM 157..184
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 9..197
FT /note="Retroviral envelope protein GP41-like"
FT /evidence="ECO:0000259|Pfam:PF00517"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AAX97265.1"
SQ SEQUENCE 335 AA; 38745 MW; 971FE6524689A6A2 CRC64;
FLGAAGSTMG AASITLTVQA RQLLSGIVQQ QSNLLKAIEA QQHLLKLTVW GIKQLQARVL
AVERYLRDQQ LLGIWGCSGK LICTTNVPWN SSWSNKSLNG IWNNMTWMQW DKEINNYTEI
IYTLIEESQN QQEKNEQELL ELDKWASLWN WFDISKWLWY IKIFIIIVGG LIGLRIVFAV
LSVINRVRQG YSPLSFQIHT PNPGDLDRPG RIEEEGGERG RDRSIRLVSG FFALIWEDLR
NLYLFSYHRL RDLILIATRI VELLGRRGWE AIKYLWNLLK YWIQELKNSA ISLLNTTAIA
VAEGTDRIIE VVQRAGRIVL NIPRRIRQGF ERALL
//