ID Q4JDM2_BIFBR Unreviewed; 343 AA.
AC Q4JDM2;
DT 02-AUG-2005, integrated into UniProtKB/TrEMBL.
DT 02-AUG-2005, sequence version 1.
DT 27-MAR-2024, entry version 76.
DE SubName: Full=Periplasmic binding protein and sugar binding domain of the LacI family protein {ECO:0000313|EMBL:ALE12747.1};
DE SubName: Full=Putative Lac I transcription regulator {ECO:0000313|EMBL:AAW48095.1};
GN ORFNames=RY69_485 {ECO:0000313|EMBL:ALE12747.1};
OS Bifidobacterium breve.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Bifidobacterium.
OX NCBI_TaxID=1685 {ECO:0000313|EMBL:AAW48095.1};
RN [1] {ECO:0000313|EMBL:AAW48095.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=UCC2003 {ECO:0000313|EMBL:AAW48095.1};
RX PubMed=16000751; DOI=10.1128/AEM.71.7.3475-3482.2005;
RA Ryan S.M., Fitzgerald G.F., van Sinderen D.;
RT "Transcriptional regulation and characterization of a novel beta-
RT fructofuranosidase-encoding gene from Bifidobacterium breve UCC2003.";
RL Appl. Environ. Microbiol. 71:3475-3482(2005).
RN [2] {ECO:0000313|EMBL:ALE12747.1, ECO:0000313|Proteomes:UP000063169}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BR3 {ECO:0000313|EMBL:ALE12747.1,
RC ECO:0000313|Proteomes:UP000063169};
RA Kim J.F., Kwak M.-J.;
RT "Complete genome sequence of Bifidobacterium breve BR3.";
RL Submitted (DEC-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AY692230; AAW48095.1; -; Genomic_DNA.
DR EMBL; CP010413; ALE12747.1; -; Genomic_DNA.
DR AlphaFoldDB; Q4JDM2; -.
DR PATRIC; fig|1685.10.peg.462; -.
DR Proteomes; UP000063169; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06288; PBP1_sucrose_transcription_regulator; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR001761; Peripla_BP/Lac1_sug-bd_dom.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF121; HTH-TYPE TRANSCRIPTIONAL REPRESSOR CYTR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF00532; Peripla_BP_1; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..55
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 343 AA; 36912 MW; 6A4BC35DB08DF09B CRC64;
MKEIANKAGV SVSTVSLVLN GRDEGRVKSE IADNVRAIAT KLGYRSNPLA SSLRTGKTHI
LGFISEEVAT TPYAGGMILG AQTAASQFGY MLITVSTDGE NSESEEIAAL KRYGTDGFLY
AKMSNRITHA PSSLAKTPLV LVDATDSLGK IPSVEPDEFQ IGYDATTRLV KAGCARIAYV
GCSEPMIAQD GRLEGYQAAL RDACLDYDDR LVVNVLNNGP ALTAVSDLFD AEHPDGFFCF
NDARAWYVYE CAARRGLTVG KDISVIGVDN HRVFAETLEP MLTTVELPHF EMGYWAVAKL
VSIIEGRSMD DVSRPATTAP LPPIDAPIPA KIHCTLIEKA SVK
//
