ID Q5F3S8_CHICK Unreviewed; 350 AA.
AC Q5F3S8;
DT 15-MAR-2005, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2005, sequence version 1.
DT 27-MAR-2024, entry version 121.
DE RecName: Full=RNA-binding protein 48 {ECO:0000256|ARBA:ARBA00015189};
GN Name=RBM48 {ECO:0000313|Ensembl:ENSGALP00010006530.1};
GN ORFNames=RCJMB04_7n4 {ECO:0000313|EMBL:CAH65206.1};
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031 {ECO:0000313|EMBL:CAH65206.1};
RN [1] {ECO:0000313|EMBL:CAH65206.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CB {ECO:0000313|EMBL:CAH65206.1};
RC TISSUE=Bursa {ECO:0000313|EMBL:CAH65206.1};
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
RN [2] {ECO:0000313|Ensembl:ENSGALP00010006530.1}
RP IDENTIFICATION.
RC STRAIN=broiler {ECO:0000313|Ensembl:ENSGALP00010006530.1};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- FUNCTION: As a component of the minor spliceosome, involved in the
CC splicing of U12-type introns in pre-mRNAs.
CC {ECO:0000256|ARBA:ARBA00035004}.
CC -!- SIMILARITY: Belongs to the RBM48 family.
CC {ECO:0000256|ARBA:ARBA00006938}.
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DR EMBL; AJ851572; CAH65206.1; -; mRNA.
DR RefSeq; NP_001026145.1; NM_001030974.1.
DR Ensembl; ENSGALT00010011666.1; ENSGALP00010006530.1; ENSGALG00010004970.1.
DR GeneID; 420555; -.
DR KEGG; gga:420555; -.
DR VEuPathDB; HostDB:geneid_420555; -.
DR eggNOG; ENOG502QSNB; Eukaryota.
DR GeneTree; ENSGT00390000004541; -.
DR HOGENOM; CLU_065720_0_0_1; -.
DR OrthoDB; 91793at2759; -.
DR PhylomeDB; Q5F3S8; -.
DR TreeFam; TF328457; -.
DR Proteomes; UP000000539; Chromosome 2.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd12442; RRM_RBM48; 1.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR039599; RBM48.
DR InterPro; IPR034264; RBM48_RRM.
DR PANTHER; PTHR20957:SF0; RNA-BINDING PROTEIN 48; 1.
DR PANTHER; PTHR20957; UNCHARACTERIZED; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000000539}.
FT REGION 248..278
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 323..350
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 262..278
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 323..337
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 350 AA; 39024 MW; 714CC5C1FE394ADA CRC64;
MAAGGGGALG EACRHHQQLG ACGSRAKYRE GRRPRAVKVY TINLESRYLL IQGVPALGVM
KELVEQFALY GAIEEYHALD EYPAEQFTEV YLIKFQNLQC ARVAKKKMDE RSFFGSLLHV
CYAPEFETVQ ETREKLQDRR KYIAKATNQR DCFLLKKTEG PRKTKSDCQW STSGSYAASH
WDPSCFPDSH GVSQNTEYPS GNHSQNLLTF PHCDNHSAET SGNFGQSTSL KMHPGGCAAP
VPLIQQRTGP ADNGTDRFMP RTTQLQERKR KREEGNKSAL IETNVNSTDI IIGPQLPEIP
KVDMDDDSLN TSATLIRNKL KEVAESVSST SVEKPGSSAT KPLVKQRRRI
//
