ID Q6L3Q3_SOLDE Unreviewed; 815 AA.
AC Q6L3Q3;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2006, sequence version 2.
DT 27-MAR-2024, entry version 79.
DE SubName: Full='chromo' domain containing protein {ECO:0000313|EMBL:AAT38742.2};
GN ORFNames=SDM1_41t00027 {ECO:0000313|EMBL:AAT38742.2};
OS Solanum demissum (Wild potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=50514 {ECO:0000313|EMBL:AAT38742.2};
RN [1] {ECO:0000313|EMBL:AAT38742.2}
RP NUCLEOTIDE SEQUENCE.
RA Buell R., Liu J., Childs K., Zaborsky J., Tallon L., Wirtz U., Wei F.,
RA Kuang H., Zhang P., Marano M., Baker B.;
RL Submitted (MAY-2004) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AAT38742.2}
RP NUCLEOTIDE SEQUENCE.
RA Childs K.;
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AC149290; AAT38742.2; -; Genomic_DNA.
DR AlphaFoldDB; Q6L3Q3; -.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR005162; Retrotrans_gag_dom.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR45835:SF102; RNA-DIRECTED DNA POLYMERASE; 1.
DR PANTHER; PTHR45835; YALI0A06105P; 1.
DR Pfam; PF03732; Retrotrans_gag; 1.
DR Pfam; PF08284; RVP_2; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 2.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 232..246
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 272..298
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 815 AA; 92659 MW; 6B4D9776E1D11D37 CRC64;
MGQRPRTSGN NSKREESSFL GDSSFVRGVT FRHTNLDRVP HSGTYMGSGV TSGTLTWIGY
HMVNTRFNGV RPVAPVNTPA EESVAKGCDR GRGLVGPGVL LSVQATQAPA NPPIAITVPK
FHALFLEKYV PWTLRDRKKD KFMALEQGGM FVAAYQAKFH PLSRYATQLV ITEEERICLF
VKGLNSELVL TPEVHGGRHL QPGQFSPPCP LVHDSQGATP STGNRPSFDR TCYNCREPRH
IRRDCPHLRM MDFAQQQTRA VVLAGNCNNG RGRPQGVRGG NQRGRGGRGN GNAGKGTVQP
SREVTWADLV ILDMADFDII LGMTWLSPYY VVLNCNTKSV ILEISGRKLI GHGCLAYLAH
IWDAEVESPS IESIHVVSEF WEVFPTDLPG MLSDRDIDFF FDLEPGTRSI SIPPYSMALA
ELRDLKAQIQ EPLDKGFIRP SASPWVSKEE VMVDPQKIEA VKNWVRLSSV TEVRSFVGIA
SYYRRFVKNF AFIASHLKIL TKKEIPFEWT EKCEESFQKL KTLLTTTQKG GVLANIEVRA
TFMEEVKAKQ FEDDSLKELK IKQCWARHKR PLLMRKWKRI AIDFVVGLPK TLGKFDSIWV
VVDRLTKSTH FILVKIDYNA QQLAKVYVKE IVRLHGVPLS IILDRGITHE RGSEIRQEGK
LSPRYIGPFE ILDGVGPVAY RLALPPNLSG VHPVFHVSML KRYHGDRDYI IKWDLVLLDK
DLQYEEKHVA ILDRDVRKLR TKEIKFVKVQ WKHRPIEEAT WETEKDMRDK YPQLFVDLET
PKSKKNERYI KCKLHSLEHG DRLLCPIESC YSYVT
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