ID Q6LIJ5_PHOPR Unreviewed; 326 AA.
AC Q6LIJ5;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 130.
DE RecName: Full=HTH araC/xylS-type domain-containing protein {ECO:0000259|PROSITE:PS01124};
GN OrderedLocusNames=PBPRB1013 {ECO:0000313|EMBL:CAG22885.1};
OS Photobacterium profundum (strain SS9).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Photobacterium.
OX NCBI_TaxID=298386 {ECO:0000313|EMBL:CAG22885.1, ECO:0000313|Proteomes:UP000000593};
RN [1] {ECO:0000313|Proteomes:UP000000593}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1253 / SS9 {ECO:0000313|Proteomes:UP000000593};
RX PubMed=15746425; DOI=10.1126/science.1103341;
RA Vezzi A., Campanaro S., D'Angelo M., Simonato F., Vitulo N., Lauro F.M.,
RA Cestaro A., Malacrida G., Simionati B., Cannata N., Romualdi C.,
RA Bartlett D.H., Valle G.;
RT "Life at depth: Photobacterium profundum genome sequence and expression
RT analysis.";
RL Science 307:1459-1461(2005).
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DR EMBL; CR378678; CAG22885.1; -; Genomic_DNA.
DR RefSeq; WP_011221080.1; NC_006371.1.
DR AlphaFoldDB; Q6LIJ5; -.
DR STRING; 298386.PBPRB1013; -.
DR KEGG; ppr:PBPRB1013; -.
DR eggNOG; COG4977; Bacteria.
DR HOGENOM; CLU_000445_59_0_6; -.
DR Proteomes; UP000000593; Chromosome 2.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd03138; GATase1_AraC_2; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002818; DJ-1/PfpI.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR PANTHER; PTHR43130; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43130:SF11; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF01965; DJ-1_PfpI; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF52317; Class I glutamine amidotransferase-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000000593};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..19
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 20..326
FT /note="HTH araC/xylS-type domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004277517"
FT DOMAIN 219..317
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 326 AA; 37108 MW; 1856CED08D7C20A1 CRC64;
MKVGFVLYNR ALITGVSLAA EMLSSAASLR DRKTQREYPF KIKLVAPSLN PPKLTAGIRL
QPDITFEDDD NFDIVVLPPM WGNPFSSISQ SPTIIPWLIK QYQHGAQLVA TGTGVCWLAE
TGLLDNQVAT THWYFYEQFT SRYPQVTLNR QASITAANGL FCTGSINSQS EMILYLIAEN
YGQKIADTIE THYGHEISKT SQQPFYQIGG QMQFDESIAL AQDWMKRHLA QPITAQRVAQ
ECKLPLRTFN RKFKDQVGQS PHQYLQKIRM EAAQHLLRDF GMSVQDVAEQ VGYKDAYHFS
TRFQQQFSIT ASQYRKMVKA KIYNAE
//
