ID   Q6ZZ99_MOUSE            Unreviewed;        89 AA.
AC   Q6ZZ99;
DT   05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT   05-JUL-2004, sequence version 1.
DT   27-MAR-2024, entry version 46.
DE   SubName: Full=MHC class II antigen {ECO:0000313|EMBL:CAG23913.1};
DE   Flags: Fragment;
GN   Name=H2Aa {ECO:0000313|EMBL:CAG23913.1};
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090 {ECO:0000313|EMBL:CAG23913.1};
RN   [1] {ECO:0000313|EMBL:CAG23913.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=SK/Jax {ECO:0000313|EMBL:CAG23913.1};
RA   Mitchison N.A.;
RT   "Promoter-coding analysis of mouse MHCII genes.";
RL   Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; AJ633701; CAG23913.1; -; Genomic_DNA.
DR   AlphaFoldDB; Q6ZZ99; -.
DR   ChiTaRS; H2-Aa; mouse.
DR   GO; GO:0009897; C:external side of plasma membrane; IEA:UniProt.
DR   GO; GO:0005764; C:lysosome; IEA:UniProt.
DR   GO; GO:0042613; C:MHC class II protein complex; IEA:InterPro.
DR   GO; GO:0042605; F:peptide antigen binding; IEA:UniProt.
DR   GO; GO:0019882; P:antigen processing and presentation; IEA:InterPro.
DR   GO; GO:0006955; P:immune response; IEA:InterPro.
DR   GO; GO:0045582; P:positive regulation of T cell differentiation; IEA:UniProt.
DR   InterPro; IPR011162; MHC_I/II-like_Ag-recog.
DR   InterPro; IPR014745; MHC_II_a/b_N.
DR   InterPro; IPR001003; MHC_II_a_N.
DR   PANTHER; PTHR19944:SF59; HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DQ ALPHA 1 CHAIN; 1.
DR   PANTHER; PTHR19944; MHC CLASS II-RELATED; 1.
DR   Pfam; PF00993; MHC_II_alpha; 1.
DR   SMART; SM00920; MHC_II_alpha; 1.
DR   SUPFAM; SSF54452; MHC antigen-recognition domain; 1.
PE   4: Predicted;
KW   Glycoprotein {ECO:0000256|ARBA:ARBA00023180}.
FT   DOMAIN          3..83
FT                   /note="MHC class II alpha chain N-terminal"
FT                   /evidence="ECO:0000259|SMART:SM00920"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:CAG23913.1"
FT   NON_TER         89
FT                   /evidence="ECO:0000313|EMBL:CAG23913.1"
SQ   SEQUENCE   89 AA;  9855 MW;  FF320D3E385F3039 CRC64;
     ADHVGFYGTT VYQSPGDIGQ YTHEFDGDEL FYVDLDKKET VWVLPEFAQL RSFEPQGGLQ
     NIAAGKYNLE ILIKDSNSTP ATNGTCSHP
//