ID Q7W072_BORPE Unreviewed; 286 AA.
AC Q7W072;
DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2003, sequence version 1.
DT 27-MAR-2024, entry version 130.
DE SubName: Full=Probable transcriptional regulator {ECO:0000313|EMBL:CAE40665.1};
GN OrderedLocusNames=BP0286 {ECO:0000313|EMBL:CAE40665.1};
OS Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Alcaligenaceae; Bordetella.
OX NCBI_TaxID=257313 {ECO:0000313|EMBL:CAE40665.1, ECO:0000313|Proteomes:UP000002676};
RN [1] {ECO:0000313|Proteomes:UP000002676}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tohama I / ATCC BAA-589 / NCTC 13251
RC {ECO:0000313|Proteomes:UP000002676};
RX PubMed=12910271; DOI=10.1038/ng1227;
RA Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R.,
RA Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L.,
RA Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A.,
RA Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I.,
RA Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T.,
RA Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S.,
RA Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E.,
RA Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M.,
RA Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S.,
RA Barrell B.G., Maskell D.J.;
RT "Comparative analysis of the genome sequences of Bordetella pertussis,
RT Bordetella parapertussis and Bordetella bronchiseptica.";
RL Nat. Genet. 35:32-40(2003).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BX640411; CAE40665.1; -; Genomic_DNA.
DR RefSeq; NP_879166.1; NC_002929.2.
DR RefSeq; WP_003807710.1; NZ_CP039022.1.
DR AlphaFoldDB; Q7W072; -.
DR STRING; 257313.BP0286; -.
DR PaxDb; 257313-BP0286; -.
DR GeneID; 69603460; -.
DR KEGG; bpe:BP0286; -.
DR PATRIC; fig|257313.5.peg.309; -.
DR eggNOG; COG2207; Bacteria.
DR HOGENOM; CLU_000445_87_4_4; -.
DR Proteomes; UP000002676; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd06124; cupin_NimR-like_N; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR003313; AraC-bd.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR11019; HTH-TYPE TRANSCRIPTIONAL REGULATOR NIMR; 1.
DR PANTHER; PTHR11019:SF159; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF02311; AraC_binding; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF51182; RmlC-like cupins; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000002676};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 181..278
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 286 AA; 31007 MW; EB0C1F4A8075B3AC CRC64;
MPAIAKDPSP RRAPAFPAPR QLSYLDLLTR QVQSAPGEMA ALATDYPAGT VSSLHRHDRG
QLLYAMSGVV TVITDLGSWV VAPGQALWIA PGVLHQTRGF ESVAIRSLYI DPAHADGLPA
ACQTIQVSPL LQALILEAVK LPPQDAGSER AGHIRALILD EMRHVCAAPL YVPMPRDARL
ARICQALLRD PANAGSLDAW AAYGGLSRRN LTRLFRAQTG ASFNAWRQKV LLMEALARLS
RGEQITAVAL DLGYGSPGAF TAMFRRALGV SPREYFRWTE APQRAD
//
