ID Q87TD7_VIBPA Unreviewed; 675 AA.
AC Q87TD7;
DT 01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT 01-JUN-2003, sequence version 1.
DT 27-MAR-2024, entry version 105.
DE SubName: Full=General secretion pathway protein D {ECO:0000313|EMBL:BAC58396.1};
GN OrderedLocusNames=VP0133 {ECO:0000313|EMBL:BAC58396.1};
OS Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=223926 {ECO:0000313|EMBL:BAC58396.1, ECO:0000313|Proteomes:UP000002493};
RN [1] {ECO:0000313|EMBL:BAC58396.1, ECO:0000313|Proteomes:UP000002493}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RIMD 2210633 {ECO:0000313|Proteomes:UP000002493};
RX PubMed=12620739; DOI=10.1016/S0140-6736(03)12659-1;
RA Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K.,
RA Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S.,
RA Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.;
RT "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism
RT distinct from that of V. cholerae.";
RL Lancet 361:743-749(2003).
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004442, ECO:0000256|RuleBase:RU004004}.
CC Membrane {ECO:0000256|ARBA:ARBA00004370}.
CC -!- SIMILARITY: Belongs to the bacterial secretin family. GSP D subfamily.
CC {ECO:0000256|ARBA:ARBA00006980}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BA000031; BAC58396.1; -; Genomic_DNA.
DR RefSeq; NP_796512.1; NC_004603.1.
DR RefSeq; WP_005478663.1; NC_004603.1.
DR AlphaFoldDB; Q87TD7; -.
DR SMR; Q87TD7; -.
DR GeneID; 1187600; -.
DR KEGG; vpa:VP0133; -.
DR PATRIC; fig|223926.6.peg.125; -.
DR eggNOG; COG1450; Bacteria.
DR HOGENOM; CLU_006756_1_1_6; -.
DR Proteomes; UP000002493; Chromosome 1.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015627; C:type II protein secretion system complex; IEA:InterPro.
DR GO; GO:0015628; P:protein secretion by the type II secretion system; IEA:InterPro.
DR Gene3D; 3.30.1370.120; -; 3.
DR InterPro; IPR049371; GspD-like_N0.
DR InterPro; IPR001775; GspD/PilQ.
DR InterPro; IPR005644; NolW-like.
DR InterPro; IPR038591; NolW-like_sf.
DR InterPro; IPR004846; T2SS/T3SS_dom.
DR InterPro; IPR013356; T2SS_GspD.
DR InterPro; IPR004845; T2SS_GspD_CS.
DR NCBIfam; TIGR02517; type_II_gspD; 1.
DR PANTHER; PTHR30332; PROBABLE GENERAL SECRETION PATHWAY PROTEIN D; 1.
DR PANTHER; PTHR30332:SF27; SECRETIN GSPD-RELATED; 1.
DR Pfam; PF00263; Secretin; 1.
DR Pfam; PF03958; Secretin_N; 3.
DR Pfam; PF21305; type_II_gspD_N0; 1.
DR PRINTS; PR00811; BCTERIALGSPD.
DR PRINTS; PR01032; PHAGEIV.
DR PROSITE; PS00875; T2SP_D; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000002493};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|RuleBase:RU004004}.
FT SIGNAL 1..24
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 25..675
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004301090"
FT DOMAIN 30..99
FT /note="GspD-like N0"
FT /evidence="ECO:0000259|Pfam:PF21305"
FT DOMAIN 125..187
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 191..258
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 266..344
FT /note="NolW-like"
FT /evidence="ECO:0000259|Pfam:PF03958"
FT DOMAIN 452..613
FT /note="Type II/III secretion system secretin-like"
FT /evidence="ECO:0000259|Pfam:PF00263"
SQ SEQUENCE 675 AA; 73317 MW; 2EE71AB2F00C75CA CRC64;
MKHWFSKSAW LLAGSLLCVP GAMANEFSAS FKGTDIQEFI NIVGRNLEKT IIVDPSVRGK
IDVRSYDVLN EEQYYSFFLN VLEVYGYAVV EMDNGVLKVI KAKDSKTSAI PVMGDGSAKG
DSVITRVVAV RNVSVRELSP LLRQLIDNAG AGNVVHYDPA NIILITGRAA VVNRLAEIIK
RVDQAGDKEI ELVELRNASA AEMVRIVEAL NKTTNQKSTP EFLEPKIVAD ERTNSILISG
DPKVRARLKR LIRQLDVEMA TKGNNRVVYL KYAKAEDLVD VLKGVSDNLQ AEKQAGQKGA
SSAQRGDVVI AAHEATNSLV LTAPPDIMMA LQDVISQLDI RRAQVLIEAL IVEMSEGDGI
NLGVQWGSLE TGAVIQYGNA GAPIGQVMVG LEEAKDTVEK KPIRDSDTGA IKYYEETTTK
GDYSTLASAL KNVNGAAMSI VMGDWTALVS AVASDSNSNI LSSPSITVMD NGEASFIVGE
EVPVITGSTA GSNNDNPFQT VDRKEVGIKL KVVPQINEGD SVQLNIEQEV SNVLGANGAV
DVRFAKRQLN TSVMIQDGQM LVLGGLVDER ALESESKVPL LGDIPVLGHL FKSTSTQTQK
RNLMVFIKPT IIRDGMTADG ITQRKYNFIR AEQLYKADQG LKLMSDDKIP VMPAFGQDRK
HPAEIQAFID QMEKN
//
