ID Q87Y88_PSESM Unreviewed; 124 AA.
AC Q87Y88;
DT 01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT 01-JUN-2003, sequence version 1.
DT 27-MAR-2024, entry version 92.
DE RecName: Full=Putative HNH nuclease YajD {ECO:0000256|ARBA:ARBA00040194};
GN OrderedLocusNames=PSPTO_3913 {ECO:0000313|EMBL:AAO57379.1};
OS Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=223283 {ECO:0000313|EMBL:AAO57379.1, ECO:0000313|Proteomes:UP000002515};
RN [1] {ECO:0000313|EMBL:AAO57379.1, ECO:0000313|Proteomes:UP000002515}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-871 / DC3000 {ECO:0000313|Proteomes:UP000002515};
RX PubMed=12928499; DOI=10.1073/pnas.1731982100;
RA Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T.,
RA Gwinn M.L., Dodson R.J., Deboy R.T., Durkin A.S., Kolonay J.F., Madupu R.,
RA Daugherty S., Brinkac L., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.,
RA Zafar N., Zhou L., Liu J., Yuan Q., Khouri H., Fedorova N., Tran B.,
RA Russell D., Berry K., Utterback T., Van Aken S.E., Feldblyum T.V.,
RA D'Ascenzo M., Deng W.L., Ramos A.R., Alfano J.R., Cartinhour S.,
RA Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B.,
RA Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A.;
RT "The complete genome sequence of the Arabidopsis and tomato pathogen
RT Pseudomonas syringae pv. tomato DC3000.";
RL Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003).
CC -!- SIMILARITY: Belongs to the HNH nuclease family.
CC {ECO:0000256|ARBA:ARBA00038412}.
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DR EMBL; AE016853; AAO57379.1; -; Genomic_DNA.
DR RefSeq; NP_793684.1; NC_004578.1.
DR RefSeq; WP_002552611.1; NC_004578.1.
DR AlphaFoldDB; Q87Y88; -.
DR STRING; 223283.PSPTO_3913; -.
DR GeneID; 73736574; -.
DR KEGG; pst:PSPTO_3913; -.
DR PATRIC; fig|223283.9.peg.4012; -.
DR eggNOG; COG1403; Bacteria.
DR HOGENOM; CLU_136125_0_0_6; -.
DR OrthoDB; 9796565at2; -.
DR PhylomeDB; Q87Y88; -.
DR Proteomes; UP000002515; Chromosome.
DR GO; GO:0004519; F:endonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00085; HNHc; 1.
DR InterPro; IPR002711; HNH.
DR InterPro; IPR003615; HNH_nuc.
DR PANTHER; PTHR41286; HNH NUCLEASE YAJD-RELATED; 1.
DR PANTHER; PTHR41286:SF1; HNH NUCLEASE YAJD-RELATED; 1.
DR Pfam; PF01844; HNH; 1.
DR SMART; SM00507; HNHc; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000002515}.
FT DOMAIN 27..83
FT /note="HNH nuclease"
FT /evidence="ECO:0000259|SMART:SM00507"
SQ SEQUENCE 124 AA; 14167 MW; 99E8745A2010DB7C CRC64;
MSTANPPSHT AKLDRILADA QRDREMGYRD KALRMYPHVC GRCAREFAGK RLSELTVHHR
DHNHDNNPQD GSNWELLCLY CHDNEHSRYT DQQYFADGSL STPKTAKATH NPFAALAGLM
KKDE
//
