GenomeNet

Database: UniProt
Entry: Q880V7_PSESM
LinkDB: Q880V7_PSESM
Original site: Q880V7_PSESM 
ID   Q880V7_PSESM            Unreviewed;       281 AA.
AC   Q880V7;
DT   01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT   01-JUN-2003, sequence version 1.
DT   27-MAR-2024, entry version 106.
DE   SubName: Full=ISPsy12, transposase OrfB {ECO:0000313|EMBL:AAO56533.1};
GN   OrderedLocusNames=PSPTO_3044 {ECO:0000313|EMBL:AAO56533.1};
OS   Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=223283 {ECO:0000313|EMBL:AAO56533.1, ECO:0000313|Proteomes:UP000002515};
RN   [1] {ECO:0000313|EMBL:AAO56533.1, ECO:0000313|Proteomes:UP000002515}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-871 / DC3000 {ECO:0000313|Proteomes:UP000002515};
RX   PubMed=12928499; DOI=10.1073/pnas.1731982100;
RA   Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T.,
RA   Gwinn M.L., Dodson R.J., Deboy R.T., Durkin A.S., Kolonay J.F., Madupu R.,
RA   Daugherty S., Brinkac L., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.,
RA   Zafar N., Zhou L., Liu J., Yuan Q., Khouri H., Fedorova N., Tran B.,
RA   Russell D., Berry K., Utterback T., Van Aken S.E., Feldblyum T.V.,
RA   D'Ascenzo M., Deng W.L., Ramos A.R., Alfano J.R., Cartinhour S.,
RA   Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B.,
RA   Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A.;
RT   "The complete genome sequence of the Arabidopsis and tomato pathogen
RT   Pseudomonas syringae pv. tomato DC3000.";
RL   Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AE016853; AAO56533.1; -; Genomic_DNA.
DR   RefSeq; NP_792838.1; NC_004578.1.
DR   AlphaFoldDB; Q880V7; -.
DR   STRING; 223283.PSPTO_3044; -.
DR   KEGG; pst:PSPTO_3044; -.
DR   PATRIC; fig|223283.9.peg.3107; -.
DR   eggNOG; COG2801; Bacteria.
DR   HOGENOM; CLU_027402_4_1_6; -.
DR   OrthoDB; 9810995at2; -.
DR   PhylomeDB; Q880V7; -.
DR   Proteomes; UP000002515; Chromosome.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004803; F:transposase activity; ISS:JCVI.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   GO; GO:0006313; P:DNA transposition; ISS:JCVI.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR025948; HTH-like_dom.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR048020; Transpos_IS3.
DR   NCBIfam; NF033516; transpos_IS3; 1.
DR   PANTHER; PTHR46889; TRANSPOSASE INSF FOR INSERTION SEQUENCE IS3B-RELATED; 1.
DR   PANTHER; PTHR46889:SF1; TRANSPOSASE INSO FOR INSERTION SEQUENCE ELEMENT IS911B-RELATED; 1.
DR   Pfam; PF13276; HTH_21; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000002515}.
FT   DOMAIN          112..274
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
SQ   SEQUENCE   281 AA;  32887 MW;  E8DA6ABE52F9ED98 CRC64;
     MSIHEPVDWL CKVFEVTRSC YYARRLRRRT PDVERLRLRS RVNELFTQGR SAPGSRSIMA
     MMQDDGEQIG RFKVRSLMRE LELVSKQPGS HAYKKATVER PDIPNILNRE FDVPAPDHVW
     CGDITYIWAQ GKWQYLAVVL DLFARRVVGW ALSGKPDADL VIKALDMAYE QRGKPQGLLF
     HSDQGSQYGS RSFRQRLWRY RMRQSMSRRG ICWDNAPMER VFRSLKTEWI PIMGYTTVQQ
     AQRDISHFLM HRYNWIRPHQ FNGGLPPAQA EKKLNVVSGI S
//
DBGET integrated database retrieval system