ID Q88CB3_PSEPK Unreviewed; 182 AA.
AC Q88CB3;
DT 01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT 01-JUN-2003, sequence version 1.
DT 27-MAR-2024, entry version 101.
DE SubName: Full=DNA-binding transcriptional repressor PuuR-putrescine {ECO:0000313|EMBL:AAN70833.1};
GN Name=puuR {ECO:0000313|EMBL:AAN70833.1};
GN OrderedLocusNames=PP_5268 {ECO:0000313|EMBL:AAN70833.1};
OS Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950
OS / KT2440).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=160488 {ECO:0000313|EMBL:AAN70833.1, ECO:0000313|Proteomes:UP000000556};
RN [1] {ECO:0000313|EMBL:AAN70833.1, ECO:0000313|Proteomes:UP000000556}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440
RC {ECO:0000313|Proteomes:UP000000556};
RX PubMed=12534463; DOI=10.1046/j.1462-2920.2002.00366.x;
RA Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H.,
RA Martins dos Santos V.A., Fouts D.E., Gill S.R., Pop M., Holmes M.,
RA Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J., Madupu R.,
RA Nelson W., White O., Peterson J., Khouri H., Hance I., Chris Lee P.,
RA Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M.,
RA Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D.,
RA Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N.,
RA Dusterhoft A., Tummler B., Fraser C.M.;
RT "Complete genome sequence and comparative analysis of the metabolically
RT versatile Pseudomonas putida KT2440.";
RL Environ. Microbiol. 4:799-808(2002).
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DR EMBL; AE015451; AAN70833.1; -; Genomic_DNA.
DR RefSeq; NP_747369.1; NC_002947.4.
DR RefSeq; WP_003253526.1; NC_002947.4.
DR AlphaFoldDB; Q88CB3; -.
DR STRING; 160488.PP_5268; -.
DR PaxDb; 160488-PP_5268; -.
DR GeneID; 83683029; -.
DR KEGG; ppu:PP_5268; -.
DR PATRIC; fig|160488.4.peg.5621; -.
DR eggNOG; COG1396; Bacteria.
DR HOGENOM; CLU_085376_1_4_6; -.
DR OrthoDB; 9814751at2; -.
DR PhylomeDB; Q88CB3; -.
DR BioCyc; PPUT160488:G1G01-5626-MONOMER; -.
DR Proteomes; UP000000556; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd02209; cupin_XRE_C; 1.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR013096; Cupin_2.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF11; HTH-TYPE TRANSCRIPTIONAL REGULATOR PUUR; 1.
DR Pfam; PF07883; Cupin_2; 1.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF51182; RmlC-like cupins; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:AAN70833.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000556}.
FT DOMAIN 7..61
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 182 AA; 20065 MW; 8CEDC6805EE37085 CRC64;
MDVGERLQAI RKLKGLSQRE LAKRAGVTNS TISMIEKNSV SPSISSLRKV LSGIPMSMVE
FFSVELEPQS PTQIVYKAHE LIDISDGAVT MKLVGKSHPN RAIAFLTEVY PPGADTGAEM
LTHDGEETGI LLEGRLELVV GNEIFVLEEG DSYYFESTRP HRFRNPFDQP ARLISAATPS
NF
//
