ID Q88J78_PSEPK Unreviewed; 367 AA.
AC Q88J78;
DT 01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT 01-JUN-2003, sequence version 1.
DT 27-MAR-2024, entry version 132.
DE SubName: Full=Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:AAN68379.1};
GN OrderedLocusNames=PP_2771 {ECO:0000313|EMBL:AAN68379.1};
OS Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950
OS / KT2440).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=160488 {ECO:0000313|EMBL:AAN68379.1, ECO:0000313|Proteomes:UP000000556};
RN [1] {ECO:0000313|EMBL:AAN68379.1, ECO:0000313|Proteomes:UP000000556}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440
RC {ECO:0000313|Proteomes:UP000000556};
RX PubMed=12534463; DOI=10.1046/j.1462-2920.2002.00366.x;
RA Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H.,
RA Martins dos Santos V.A., Fouts D.E., Gill S.R., Pop M., Holmes M.,
RA Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J., Madupu R.,
RA Nelson W., White O., Peterson J., Khouri H., Hance I., Chris Lee P.,
RA Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M.,
RA Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D.,
RA Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N.,
RA Dusterhoft A., Tummler B., Fraser C.M.;
RT "Complete genome sequence and comparative analysis of the metabolically
RT versatile Pseudomonas putida KT2440.";
RL Environ. Microbiol. 4:799-808(2002).
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DR EMBL; AE015451; AAN68379.1; -; Genomic_DNA.
DR RefSeq; NP_744915.1; NC_002947.4.
DR RefSeq; WP_010953682.1; NC_002947.4.
DR AlphaFoldDB; Q88J78; -.
DR STRING; 160488.PP_2771; -.
DR PaxDb; 160488-PP_2771; -.
DR GeneID; 83680644; -.
DR KEGG; ppu:PP_2771; -.
DR PATRIC; fig|160488.4.peg.2938; -.
DR eggNOG; COG3829; Bacteria.
DR HOGENOM; CLU_000445_0_7_6; -.
DR OrthoDB; 9804019at2; -.
DR PhylomeDB; Q88J78; -.
DR BioCyc; PPUT160488:G1G01-2951-MONOMER; -.
DR Proteomes; UP000000556; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF122; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YPLP-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000000556}.
FT DOMAIN 21..250
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 367 AA; 40956 MW; 42BDA0E99479A7A0 CRC64;
MQLLTLPPSP SLATSIRATA QVFEDARSQA LLAHLQQVAP SEASVLIIGE TGTGKELVAR
HIHNLSGRRN GPFVAVNCGA FSESLVEAEL FGHEKGAFTG ALAAKAGWFE EGNGGTLFLD
EIGDLPMAIQ VKLLRVLQER EVVRLGSRKS IPIDVRVVAA TNVQLDKAIA AGNFREDLYY
RLNVVSLQLY PLRERPGDIL PLTRHFIKTY CNRLGYGEVR LSPEAERKLV SYDWPGNIRE
LENVIHHTLL VCRNGLVQDD DLRLSHLRIE RQDKSPVSTA ESAEEQLLRA FQRLFEEQAG
GLHEKVEDSL LRSAYRFCHC NQVHTASLLG LSRNITRARL IAIGELVVNR RRPEPQTRPE
RAMQLSI
//
