ID Q88RP5_PSEPK Unreviewed; 298 AA.
AC Q88RP5;
DT 01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT 01-JUN-2003, sequence version 1.
DT 27-MAR-2024, entry version 127.
DE SubName: Full=HTH-type transcriptional regulator TrpI {ECO:0000313|EMBL:AAN65718.1};
GN Name=trpI {ECO:0000313|EMBL:AAN65718.1};
GN OrderedLocusNames=PP_0084 {ECO:0000313|EMBL:AAN65718.1};
OS Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950
OS / KT2440).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=160488 {ECO:0000313|EMBL:AAN65718.1, ECO:0000313|Proteomes:UP000000556};
RN [1] {ECO:0000313|EMBL:AAN65718.1, ECO:0000313|Proteomes:UP000000556}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440
RC {ECO:0000313|Proteomes:UP000000556};
RX PubMed=12534463; DOI=10.1046/j.1462-2920.2002.00366.x;
RA Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H.,
RA Martins dos Santos V.A., Fouts D.E., Gill S.R., Pop M., Holmes M.,
RA Brinkac L., Beanan M., DeBoy R.T., Daugherty S., Kolonay J., Madupu R.,
RA Nelson W., White O., Peterson J., Khouri H., Hance I., Chris Lee P.,
RA Holtzapple E., Scanlan D., Tran K., Moazzez A., Utterback T., Rizzo M.,
RA Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D.,
RA Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N.,
RA Dusterhoft A., Tummler B., Fraser C.M.;
RT "Complete genome sequence and comparative analysis of the metabolically
RT versatile Pseudomonas putida KT2440.";
RL Environ. Microbiol. 4:799-808(2002).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; AE015451; AAN65718.1; -; Genomic_DNA.
DR RefSeq; NP_742254.1; NC_002947.4.
DR RefSeq; WP_010951490.1; NC_002947.4.
DR AlphaFoldDB; Q88RP5; -.
DR STRING; 160488.PP_0084; -.
DR PaxDb; 160488-PP_0084; -.
DR DNASU; 1043565; -.
DR GeneID; 83677330; -.
DR KEGG; ppu:PP_0084; -.
DR PATRIC; fig|160488.4.peg.87; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_37_2_6; -.
DR OrthoDB; 6787458at2; -.
DR PhylomeDB; Q88RP5; -.
DR BioCyc; PPUT160488:G1G01-88-MONOMER; -.
DR Proteomes; UP000000556; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08482; PBP2_TrpI; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR037418; TrpI_PBP2.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30537:SF74; HTH-TYPE TRANSCRIPTIONAL REGULATOR TRPI; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000556}.
FT DOMAIN 6..63
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 298 AA; 32239 MW; 1A55D3D05CF37EE7 CRC64;
MAHDLPPLNA LRAFEATARL NSVSQAAEAL HVTHGAVSRQ IKVLEEHLGV ALFVKDGRGI
KLTDAGMRLR DASGEAFDRL RSVCSELSRD VSEAPFVLGC SGSLLARWFI PRLGRLQADL
PELRLHLSAG EGDLDPRRPG LDALLVYAEP PWPADMQVHV LAEECIGPVL SPHFAGFQRL
QGAPAKALLG EALLHTTSRP QAWPTWVVQQ GLEPAAIHYG QAFEHLYYLL EAAVAGLGVA
IAPQPLVADD LRAGRLSAPW GFSPTQAALA LWVPRRAADG RAEQLAQWLR AELARQSA
//
