ID Q8GS41_ARATH Unreviewed; 203 AA.
AC Q8GS41;
DT 01-MAR-2003, integrated into UniProtKB/TrEMBL.
DT 01-MAR-2003, sequence version 1.
DT 27-MAR-2024, entry version 148.
DE SubName: Full=Putative RING zinc finger {ECO:0000313|EMBL:BAC42844.1};
DE SubName: Full=RING/U-box superfamily protein {ECO:0000313|EMBL:AED95703.1};
GN OrderedLocusNames=At5g48655 {ECO:0000313|Araport:AT5G48655,
GN ECO:0000313|EMBL:AED95703.1}, At5g48655/K15N18.13
GN {ECO:0000313|EMBL:BAC42844.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAN13007.1};
RN [1] {ECO:0000313|EMBL:AED95703.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130714; DOI=10.1038/35048507;
RG Kazusa DNA Research Institute;
RG Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG European Union Arabidopsis Genome Sequencing Consortium;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T., Entian K.D.,
RA Terryn N., Hartley N., Bent E., Johnson S., Langham S.A., McCullagh B.,
RA Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H.,
RA Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Lankhorst R.K., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S.,
RA Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J.,
RA Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K., Rudd S., Schoof H.,
RA Schueller C., Zaccaria P., Mewes H.W., Bevan M., Fransz P.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2] {ECO:0000313|EMBL:AAN13007.1}
RP NUCLEOTIDE SEQUENCE.
RA Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M.,
RA Quach H.L., Tang C.C., Toriumi M., Wallender E.K., Wong C., Wu H.C., Yu G.,
RA Yuan S., Chen H., Cheuk R., Jones T., Kim C.J., Nguyen M., Palm C.J.,
RA Shinn P., Southwick A., Tripp M.G., Wu T., Davis R.W., Ecker J.R.,
RA Theologis A.;
RT "Arabidopsis Open Reading Frame (ORF) Clones.";
RL Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:BAC42844.1}
RP NUCLEOTIDE SEQUENCE.
RA Seki M., Iida K., Satou M., Sakurai T., Akiyama K., Ishida J., Nakajima M.,
RA Enju A., Kamiya A., Narusaka M., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Arabidopsis thaliana full-length cDNA.";
RL Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AED95703.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:AED95703.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; AY150482; AAN13007.1; -; mRNA.
DR EMBL; CP002688; AED95703.1; -; Genomic_DNA.
DR EMBL; CP002688; AED95704.1; -; Genomic_DNA.
DR EMBL; CP002688; AED95705.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70501.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70502.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70503.1; -; Genomic_DNA.
DR EMBL; AK118224; BAC42844.1; -; mRNA.
DR RefSeq; NP_001318762.1; NM_001344791.1.
DR RefSeq; NP_001332107.1; NM_001344792.1.
DR RefSeq; NP_001332108.1; NM_001344793.1.
DR RefSeq; NP_568701.1; NM_124242.4.
DR RefSeq; NP_851156.1; NM_180825.2.
DR RefSeq; NP_974908.1; NM_203179.2.
DR AlphaFoldDB; Q8GS41; -.
DR SMR; Q8GS41; -.
DR IntAct; Q8GS41; 1.
DR STRING; 3702.Q8GS41; -.
DR PaxDb; 3702-AT5G48655-3; -.
DR ProteomicsDB; 189806; -.
DR EnsemblPlants; AT5G48655.1; AT5G48655.1; AT5G48655.
DR EnsemblPlants; AT5G48655.2; AT5G48655.2; AT5G48655.
DR EnsemblPlants; AT5G48655.3; AT5G48655.3; AT5G48655.
DR EnsemblPlants; AT5G48655.4; AT5G48655.4; AT5G48655.
DR EnsemblPlants; AT5G48655.5; AT5G48655.5; AT5G48655.
DR EnsemblPlants; AT5G48655.6; AT5G48655.6; AT5G48655.
DR GeneID; 834923; -.
DR Gramene; AT5G48655.1; AT5G48655.1; AT5G48655.
DR Gramene; AT5G48655.2; AT5G48655.2; AT5G48655.
DR Gramene; AT5G48655.3; AT5G48655.3; AT5G48655.
DR Gramene; AT5G48655.4; AT5G48655.4; AT5G48655.
DR Gramene; AT5G48655.5; AT5G48655.5; AT5G48655.
DR Gramene; AT5G48655.6; AT5G48655.6; AT5G48655.
DR KEGG; ath:AT5G48655; -.
DR Araport; AT5G48655; -.
DR TAIR; AT5G48655; -.
DR eggNOG; KOG0320; Eukaryota.
DR HOGENOM; CLU_072702_2_1_1; -.
DR OMA; CKACINA; -.
DR OrthoDB; 2919802at2759; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q8GS41; baseline and differential.
DR GO; GO:0005730; C:nucleolus; IDA:TAIR.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0032183; F:SUMO binding; IPI:TAIR.
DR GO; GO:0140082; F:SUMO-ubiquitin ligase activity; IEA:InterPro.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IGI:TAIR.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR049627; SLX8.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR47094; ELFLESS, ISOFORM B; 1.
DR PANTHER; PTHR47094:SF1; RING ZINC FINGER-RELATED; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 1: Evidence at protein level;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Proteomics identification {ECO:0007829|PeptideAtlas:Q8GS41};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 148..186
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 203 AA; 22305 MW; 7C1F2C7916AD5EBE CRC64;
MNTSEVRVPR GNRRRKAVID LNAVPVDQEG TSASVRTLTV PITPSQPAPT MIDVDAIEDD
VIESSASAFA EAKSKSRNAR RRPLMVDVES GGTTRFPANI SNKRRRIPSS ESVIDCEHAS
VNDEVNMSSR VSRSKAPAPP PEEPKFTCPI CMCPFTEEMS TKCGHIFCKG CIKMAISRQG
KCPTCRKKVT AKELIRVFLP TTR
//
