ID Q9FKQ8_ARATH Unreviewed; 733 AA.
AC Q9FKQ8;
DT 01-MAR-2001, integrated into UniProtKB/TrEMBL.
DT 01-MAR-2001, sequence version 1.
DT 27-MAR-2024, entry version 135.
DE SubName: Full=LMBR1-like membrane protein {ECO:0000313|EMBL:AED98034.1};
GN Name=MNA5.1 {ECO:0000313|EMBL:AED98034.1};
GN Synonyms=MNA5_1 {ECO:0000313|EMBL:AED98034.1};
GN OrderedLocusNames=At5g65290 {ECO:0000313|EMBL:AED98034.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:BAB11551.1};
RN [1] {ECO:0000313|EMBL:BAB11551.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT features of the regions of 1,381,565 bp covered by twenty one physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:131-145(1998).
RN [2] {ECO:0000313|EMBL:AED98034.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130714; DOI=10.1038/35048507;
RG Kazusa DNA Research Institute;
RG Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG European Union Arabidopsis Genome Sequencing Consortium;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T., Entian K.D.,
RA Terryn N., Hartley N., Bent E., Johnson S., Langham S.A., McCullagh B.,
RA Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H.,
RA Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Lankhorst R.K., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S.,
RA Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J.,
RA Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K., Rudd S., Schoof H.,
RA Schueller C., Zaccaria P., Mewes H.W., Bevan M., Fransz P.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [3] {ECO:0000313|EMBL:BAF00778.1}
RP NUCLEOTIDE SEQUENCE.
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA Hayashizaki Y., Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AED98034.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:AED98034.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the LIMR family.
CC {ECO:0000256|ARBA:ARBA00010487}.
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DR EMBL; CP002688; AED98034.1; -; Genomic_DNA.
DR EMBL; AB011479; BAB11551.1; -; Genomic_DNA.
DR EMBL; AK228888; BAF00778.1; -; mRNA.
DR RefSeq; NP_201332.1; NM_125927.4.
DR AlphaFoldDB; Q9FKQ8; -.
DR SMR; Q9FKQ8; -.
DR STRING; 3702.Q9FKQ8; -.
DR PaxDb; 3702-AT5G65290-1; -.
DR ProteomicsDB; 185248; -.
DR EnsemblPlants; AT5G65290.1; AT5G65290.1; AT5G65290.
DR GeneID; 836654; -.
DR Gramene; AT5G65290.1; AT5G65290.1; AT5G65290.
DR TAIR; AT5G65290; -.
DR eggNOG; KOG2296; Eukaryota.
DR OrthoDB; 1068841at2759; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FKQ8; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR006876; LMBR1-like_membr_prot.
DR PANTHER; PTHR21355:SF0; G-PROTEIN COUPLED RECEPTOR-ASSOCIATED PROTEIN LMBRD2; 1.
DR PANTHER; PTHR21355; UNCHARACTERIZED; 1.
DR Pfam; PF04791; LMBR1; 1.
PE 1: Evidence at protein level;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Proteomics identification {ECO:0007829|PeptideAtlas:Q9FKQ8,
KW ECO:0007829|ProteomicsDB:Q9FKQ8};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..24
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 31..52
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 72..92
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 113..134
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 146..167
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 348..370
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 390..411
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 483..504
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 615..634
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 260..287
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 733 AA; 83168 MW; 939587B363C7F9E7 CRC64;
MWVFYLISLP LTLGLVVFTL RYFAGPEIPR YVLITVGYTW FCSVSVIILA PADIWTTLSL
QPDHPENGAI SFLWSWSYWS TFLLTWAVVP LIQGFEDAGD FTVSERLKTS VHVNLVFYLV
LGFIGLLGLI LLIMMHRNWT GSILGYAMAC SNTFGLVTGA FLLGFGLSEI PKTLWKNADW
TTRQKVLSHK IAKIAVKLDN AHQELSNAIV VAQATSTQMS KRDPMRPYMN VIDAMLAKMF
REDPSFKPQG GQLGENDMDY DTDEKSMATL RRHLRNAKDE YYRYKSEYLT YVTEALVLED
TMKNYERRDA TGWKYISSFR ATRTGKMGNL LDSLEFMWRC ILKKQIQMVL AVVMGIMSAA
ILLAEATLLL SKLDLSLFSI LISSVKSDEL LVQAFAFVPL VYMCVCTYYS LFKIGMLMIY
SLTPRQTSSV NLLMICSMIA RYAPPISYNF INLIQLHSET IFEKKMGRID DAVPVFGQRF
NEIYPLIMVI YTLLVASNFF DRIFNYFGSW KRFRFQTETE DTDGFDPSGL MILKKERTWL
EEGQKVGEHV LPLARNFNDV DIEPGSNFSE NSSVEMKMSS SYDIDTLKGS SSKDDMSRKY
GSAREAITNK YAAIREQQNK HSPSSMTKPE NMASAKVSLL ETDNSGPSNG QGSGEPSSRL
ASTWRNMKLG IQSFKENVAT KKFLPLRQSP ETTALTSTRV VTSSVPQSLD EIFQRLKNRS
VEHSPYLDDD DEV
//
