ID Q9LBL1_BACCE Unreviewed; 662 AA.
AC Q9LBL1;
DT 01-OCT-2000, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2000, sequence version 1.
DT 24-JAN-2024, entry version 71.
DE RecName: Full=serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000256|ARBA:ARBA00012448};
DE EC=3.4.16.4 {ECO:0000256|ARBA:ARBA00012448};
GN Name=pbp3 {ECO:0000313|EMBL:BAA95415.1};
OS Bacillus cereus.
OC Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus;
OC Bacillus cereus group.
OX NCBI_TaxID=1396 {ECO:0000313|EMBL:BAA95415.1};
RN [1] {ECO:0000313|EMBL:BAA95415.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Ts-4 {ECO:0000313|EMBL:BAA95415.1};
RX PubMed=11866118; DOI=10.1271/bbb.66.44;
RA Miyamoto T., Sayed M.A., Sasahara R., Sukimoto K., Umezaki A., Honjoh K.,
RA Iio M., Hatano S.;
RT "Cloning and overexpression of Bacillus cereus penicillin-binding protein 3
RT gene in Escherichia coli.";
RL Biosci. Biotechnol. Biochem. 66:44-50(2002).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Preferential cleavage: (Ac)2-L-Lys-D-Ala-|-D-Ala. Also
CC transpeptidation of peptidyl-alanyl moieties that are N-acyl
CC substituents of D-alanine.; EC=3.4.16.4;
CC Evidence={ECO:0000256|ARBA:ARBA00034000};
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
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DR EMBL; AB039287; BAA95415.1; -; Genomic_DNA.
DR PIR; JC7803; JC7803.
DR AlphaFoldDB; Q9LBL1; -.
DR UniPathway; UPA00219; -.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR GO; GO:0009002; F:serine-type D-Ala-D-Ala carboxypeptidase activity; IEA:UniProtKB-EC.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0046677; P:response to antibiotic; IEA:InterPro.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR007887; MecA_N.
DR InterPro; IPR032710; NTF2-like_dom_sf.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR PANTHER; PTHR30627:SF25; PENICILLIN-BINDING PROTEIN 3; 1.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR Pfam; PF05223; MecA_N; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF54427; NTF2-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136}.
FT DOMAIN 24..142
FT /note="NTF2-like N-terminal transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF05223"
FT DOMAIN 150..317
FT /note="Penicillin-binding protein dimerisation"
FT /evidence="ECO:0000259|Pfam:PF03717"
FT DOMAIN 351..659
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
FT REGION 144..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 662 AA; 73066 MW; 66589F36B810CDFB CRC64;
MRKIWGILSL CLTFMLVGCG KEEKPQEAFD TYVKAWNKQK FADMYDQLSK NAKKDISKKE
FTEKYEKIYS GIEVKDLKVE TGEVKEDKKD EGPVPFKVSM DTVGGKITFG HEAKMVKEKD
GDKESWKIDW TPDFIFPGMT KDSKVRMQTT QPKRGEIYDR NGKGSCTNGK ASEIGLIPEK
LGDAAPQTKE TVAKLLNMSV EEIDQKLAAK WVKPGYLVPI GILPEGATQN TYIDLPGVST
KPVNVRTYPL GEAAAHLTGY IGKVNAEDLK TLQKKGYQAD DPVGKAGLEQ VLEEKLRGKK
GDRVFVEDAQ GKEIKNLAKT DAVDGENVTL TIDSAVQGKP YNEMKGEAGS SAAINPKSGE
TIALVSSPAY DPNIIARGTS KAQREAWNND PKKPMTNRFT QLSVPGSVFK PITAAIGLET
KTIDPKEELK IEGLKWTKDS SWGNYYVTRC ERCKFRLILD KAMKYSDNIY FAQEALKIGK
DKFMSEAKKF GFDEKLPIEY GFPASKIAND GIKNDIQMAD TGYGQGQVLM TPLHLALTYA
PIVNDGTIPS PYIIKTDKQP KAWKENVISK GNQDILKTAM TKVINDPDGT GKIAKIDGMT
LAGKTGTAEL RVSKEAEGKE LGRFAAFDLN SPDMVITMMI DDVKGRGGSN IPAEKVKHVF
QK
//