ID Q9LSB0_ARATH Unreviewed; 653 AA.
AC Q9LSB0;
DT 01-OCT-2000, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2000, sequence version 1.
DT 24-JAN-2024, entry version 122.
DE SubName: Full=Ankyrin repeat family protein {ECO:0000313|EMBL:ANM63895.1};
GN OrderedLocusNames=At3g18670 {ECO:0000313|EMBL:ANM63895.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:BAB01793.1};
RN [1] {ECO:0000313|EMBL:BAB01793.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2] {ECO:0000313|EMBL:ANM63895.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130713; DOI=10.1038/35048706;
RG European Union Chromosome 3 Arabidopsis Sequencing Consortium;
RG Institute for Genomic Research;
RG Kazusa DNA Research Institute;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Blocker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M.,
RA Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N.,
RA Artiguenave F., Robert C., Brottier P., Wincker P., Cattolico L.,
RA Weissenbach J., Saurin W., Quetier F., Schafer M., Muller-Auer S.,
RA Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N.,
RA Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P.,
RA Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S.,
RA Simionati B., Conrad A., Hornischer K., Kauer G., Lohnert T.H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schon O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwalder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.W., Mayer K.F., Kaul S.,
RA Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3] {ECO:0000313|EMBL:ANM63895.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:ANM63895.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; CP002686; ANM63895.1; -; Genomic_DNA.
DR EMBL; AB026654; BAB01793.1; -; Genomic_DNA.
DR RefSeq; NP_001325956.1; NM_001338351.1.
DR AlphaFoldDB; Q9LSB0; -.
DR SMR; Q9LSB0; -.
DR STRING; 3702.Q9LSB0; -.
DR EnsemblPlants; AT3G18670.2; AT3G18670.2; AT3G18670.
DR GeneID; 821398; -.
DR Gramene; AT3G18670.2; AT3G18670.2; AT3G18670.
DR KEGG; ath:AT3G18670; -.
DR TAIR; AT3G18670; -.
DR OrthoDB; 830396at2759; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LSB0; baseline and differential.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 2.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR026961; PGG_dom.
DR PANTHER; PTHR24177:SF33; ANKYRIN REPEAT FAMILY PROTEIN; 1.
DR PANTHER; PTHR24177; CASKIN; 1.
DR Pfam; PF12796; Ank_2; 1.
DR Pfam; PF13962; PGG; 1.
DR SMART; SM00248; ANK; 5.
DR SUPFAM; SSF48403; Ankyrin repeat; 2.
DR PROSITE; PS50297; ANK_REP_REGION; 1.
DR PROSITE; PS50088; ANK_REPEAT; 1.
PE 1: Evidence at protein level;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW ProRule:PRU00023}; Membrane {ECO:0000256|SAM:Phobius};
KW Proteomics identification {ECO:0007829|PeptideAtlas:Q9LSB0};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 535..558
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 579..601
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 607..626
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 83..106
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 487..598
FT /note="PGG"
FT /evidence="ECO:0000259|Pfam:PF13962"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 653 AA; 74813 MW; 40ED474EC90499BC CRC64;
MDTEKGYPRG FRAESLRPET GPRSFRFDSM QIDEAADLQK DEIRQENSTY LVLFKNIDSG
ELEATKDFLD RNPEALTAIL TSNGDTPIHK AVLSGHIKIV EEIIRRIHDP EQVLKIKNDN
GYTALTYAAT GGIVRIAECL VNKCPGLVSV RNAKEHIPIV VASLYGHKHL VQYLYSHTPL
SDLDPCDDSD EHKGKNGAML VTNCIVDGLY CIALDLIQRY PKLAYTRDSD NDTAIMALAQ
TPYAFPSGTR LAFWQRWIYS CIHIEKINNP HEVNNHHHHH QYRNSQDHNS IQEKLMKHLK
YLFPRIIRRV YKLKLGHAQA KEILDCICQE IPKFDAAQQK NAGLNQALFK AVENGIVEYI
EEMMRHYPDI VWSKNSSGLN IFFYAVSQRQ EKIFSLIYNI GAKKNILATN WDIFHNNMLH
HAAYRAPASR LNLIPGAALQ MQRELQWFKE VEKLVQPKHR KMVNLKQKKT PKALFTDQHK
DLVEQGEKWM KETATSCTVV AALITTMMFS SAFTVPGGYR SDGMPLYIHQ HRFKIFLISD
AISLFTSCMS LLMFLGILKS RYREEDFLRS LPTKLIVGLL ALFLSMATMI VTFVVTLMTL
VGEKISWVSA QFMFLAVIPL GMFVVLQFPV LLEIFRATYC PNVFDKPRRV FKL
//
