ID Q9SFY4_ARATH Unreviewed; 1840 AA.
AC Q9SFY4;
DT 01-MAY-2000, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2000, sequence version 1.
DT 27-MAR-2024, entry version 97.
DE SubName: Full=T22C5.20 {ECO:0000313|EMBL:AAF24949.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAF24949.1};
RN [1] {ECO:0000313|EMBL:AAF24949.1}
RP NUCLEOTIDE SEQUENCE.
RA Chao Q., Brooks S., Buehler E., Johnson-Hopson C., Khan S., Kim C.,
RA Shinn P., Altafi H., Bei Q., Chin C., Chiou J., Choi E., Conn L.,
RA Conway A., Gonzales A., Hansen N., Howng B., Koo T., Lam B., Lee J.,
RA Lenz C., Li J., Liu A., Liu K., Liu S., Mukharsky N., Nguyen M., Palm C.,
RA Pham P., Sakano H., Schwartz J., Southwick A., Thaveri A., Toriumi M.,
RA Vaysberg M., Yu G., Federspiel N.A., Theologis A., Ecker J.R.;
RT "Genomic sequence for Arabidopsis thaliana BAC T22C5 from chromosome I.";
RL Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3] {ECO:0000313|EMBL:AAF24949.1}
RP NUCLEOTIDE SEQUENCE.
RA Chao Q., Brooks S., Buehler E., Johnson-Hopson C., Khan S., Kim C.,
RA Shinn P., Altafi H., Bei B., Chin C., Chiou J., Choi E., Conn L.,
RA Conway A., Gonzalez A., Hansen N., Howing B., Koo T., Lam B., Lee J.,
RA Lenz C., Li J., Liu A., Liu J., Liu S., Mukharsky N., Nguyen M., Palm C.,
RA Pham P., Sakano H., Schwartz J., Southwick A., Thaveri A., Toriumi M.,
RA Vaysberg M., Yu G., Davis R., Federspiel N., Theologis A., Ecker J.;
RL Submitted (OCT-2000) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AC012375; AAF24949.1; -; Genomic_DNA.
DR ExpressionAtlas; Q9SFY4; baseline and differential.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0043130; F:ubiquitin binding; IEA:InterPro.
DR CDD; cd14364; CUE_ASCC2; 1.
DR CDD; cd00590; RRM_SF; 1.
DR CDD; cd21546; SPOC_FPA-like; 1.
DR Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 1.
DR InterPro; IPR041800; ASCC2_CUE.
DR InterPro; IPR003892; CUE.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR012921; SPOC_C.
DR InterPro; IPR009060; UBA-like_sf.
DR PANTHER; PTHR21494; ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100; 1.
DR PANTHER; PTHR21494:SF2; NUCLEIC ACID BINDING PROTEIN; 1.
DR Pfam; PF02845; CUE; 1.
DR Pfam; PF07744; SPOC; 1.
DR SMART; SM00546; CUE; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF46934; UBA-like; 1.
DR PROSITE; PS51140; CUE; 1.
PE 4: Predicted;
FT DOMAIN 1493..1536
FT /note="CUE"
FT /evidence="ECO:0000259|PROSITE:PS51140"
FT REGION 1..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 302..322
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 404..428
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 447..480
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 680..713
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 789..881
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1032..1122
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1546..1608
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1658..1683
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1743..1840
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 303..322
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 453..480
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 697..713
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 802..816
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 832..881
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1058..1097
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1105..1121
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1571..1602
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1746..1762
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1765..1783
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1784..1802
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1814..1830
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1840 AA; 202907 MW; 130ACE4E974B9405 CRC64;
MACAEQPIKK RRLYESIPES HPPPPPQLES QSPSTVVSSF PAPVTPSPPS QEEIQTRSRN
REEIRRVHDC YKRLKSCVAQ RDGGGRSANL EQAYRSLISA SRGCTSVKRL VADLVPRYAL
YCPTAIGDAV QAVIDMHNFS LEALKRGQDA DGVAFQTAKA CIFGLVDLCS AALSKKTSSP
GARDICSAVF RNVLTFFVLS FEGKNIFQIV DKSDLKLQDP DEIFSQLMQK LSDGNSLPLI
KLSQFRVLAL LKVFFNFPKK SIATCFGFFN SSSTEDVATG RYLITHMTEK INDIDAASIE
PEVDENSGQT GSNNIEATGK NAEGLNGVQE ASNSLTSCLL EMVIRKSSSI GRWAFFQYKK
ICSLSSFVDI SSAVTSLEGI FGFVGKNIKL EDCQMDSDED DYGKFSVSHV KPHSSADNDV
RSSAGSVYDA GGSRSMDFET VDQRDLSCGR SSVPRGLLNQ HTPSPSARGP SDLRSNSTDR
RNNFVLAGSP VYQAVPHGPS SGQIAWYLDG DPTAFDIFPA SGQLWLGYLG PDETEGHLRF
QLDRYGPVDR FFFDPVKGFA LAEYRSIIDA IRAREYLRAQ FPWRIKFMDI GVGARGSLNG
VAYGYCTHLY IGGISSQWER DEIVHESRQA LYKGPRMVTD LYYEHALLME FDTPDDAAIV
MAHLRFFRGE KSKFHLASIN RPLPHEDGGS HPERHLQVPP SSKQDSGSGE YVSPLMSTDN
HCNSVPPGAT FQQNWPAAGS TLVNSAQGDV YETKTTLPQS QELLHVCPYQ LRASLQCLLH
RHLKSLHLPT SSQMQGPPAQ QVSGPFMPPP VHPVSQPQGP QVQQFDQLYP PPPLGHSLPS
VLQPPLQPQS QPPEPPPEMM PPPPQALPPP LPHSHPPLVP PPPFSPLLSP RLPPMVTQLC
GSEASKQNIG HQWQGALSKS GVHYSTIIAQ RLESDICKYI IGSPEPVQWP VKLDMTKRTD
MKNVKATFAN TQPHKLQDFI TYLKQRDCAG VIKIPASSPM WARHLFILPH SQETCSLLSV
SPSSSECLIE TTMSNRRSNR QDENTRYVPK GHQQQKFVPK PMNPTPTSNS TPFPVSLSSS
LRQSDSSGAS SRVSASGGSR VRIGDQGQLV SSKSPAQGGG SFVNYLPQDE AVAAGLGPDD
GGLDPVESQG VVDLLNRELT RLLKLNPRDF WREVASDASL HDFLDSFLQF RSRWYDFPFH
GVKDRPIGIP VLKLLIASVR KIMKDKKLLD LPKLLDICAI YGHENAELTK SLTLVSSANS
EDHGRRQLHS DLLEVMDFIN DGVVSLDAFI SAYTPAVFIL ACPVETSYGS DELLRSLVRL
HDSLLPSLHR GFQVLFKDED HDSLSDISTS LNMLSTRIGS LCWKILDICY LSNDKFNHET
SIPAVTKMFP SRVEDPMVRA DILIQTFREI SGLSEQSLES KNRLLQKIEK NYRIIDRLRS
LQNAGWISME DEQLQYLSMI MLHSADTFSM KESPLLLTDG RNAEELMDEN AVVMQSKISQ
IKDIFPEYGN GFLAACLEAY NQNPEEVIQR ILEGTLHEDL QRLDTSLETM PQPKSAPTLR
SKDKGKGKLI ESDTSSSASA IYTEKPITRP SLPASSASSA TVGRFVRKPK DDTPSYKILD
ARKESDRERN AALLAQYEYD DEYDDSFDDL GLSIAESGTE ESGAFGNRAG SEPSDAPKWG
SRKNPQFYVK DGKNYSYKVA GAVAVANANE ASLVNEAEGD KILGLGRGGN IPLGAVRKLT
EYQAQRDEKG QSNVNVNPSD GRENGRNWRG VRGRGRGVVN REQPQEKSNE SSNNNSEVNT
EAENGGGRGR GRGRRGGGGG RNHNHKDRAM KKHIASVSGF
//
