ID Q9SKM4_ARATH Unreviewed; 203 AA.
AC Q9SKM4;
DT 01-MAY-2000, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2000, sequence version 1.
DT 27-MAR-2024, entry version 140.
DE SubName: Full=Disease resistance protein (TIR class), putative {ECO:0000313|EMBL:AAD17444.1};
DE SubName: Full=Toll-Interleukin-Resistance (TIR) domain family protein {ECO:0000313|EMBL:AEC05685.1};
GN Name=ATTX12 {ECO:0000313|TAIR:AT2G03300};
GN OrderedLocusNames=At2g03300 {ECO:0000313|Araport:AT2G03300,
GN ECO:0000313|EMBL:AEC05685.1};
GN ORFNames=T4M8.27 {ECO:0000313|EMBL:AEC05685.1}, T4M8_27
GN {ECO:0000313|EMBL:AEC05685.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAD17444.1};
RN [1] {ECO:0000313|EMBL:AEC05685.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D.,
RA Fujii C.Y., Mason T., Bowman C.L., Barnstead M., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2] {ECO:0000313|EMBL:AAD17444.1}
RP NUCLEOTIDE SEQUENCE.
RA Lin X., Kaul S., Shea T.P., Fujii C.Y., Shen M., VanAken S.E.,
RA Barnstead M.E., Mason T.M., Bowman C.L., Ronning C.M., Benito M.-I.,
RA Carrera A.J., Creasy T.H., Buell C.R., Town C.D., Nierman W.C.,
RA Fraser C.M., Venter J.C.;
RL Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AAM15034.1}
RP NUCLEOTIDE SEQUENCE.
RA Rounsley S.D., Lin X., Kaul S., Shea T.P., Fujii C.Y., Mason T.M., Shen M.,
RA Ronning C.M., Fraser C.M., Somerville C.R., Venter J.C.;
RL Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AAD17444.1}
RP NUCLEOTIDE SEQUENCE.
RA Town C.D., Kaul S.;
RL Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:AEC05685.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|EMBL:AEC05685.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [7] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; AC006284; AAD17444.1; -; Genomic_DNA.
DR EMBL; AC005313; AAM15034.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC05685.1; -; Genomic_DNA.
DR PIR; T02696; T02696.
DR RefSeq; NP_178429.1; NM_126381.1.
DR AlphaFoldDB; Q9SKM4; -.
DR SMR; Q9SKM4; -.
DR STRING; 3702.Q9SKM4; -.
DR PaxDb; 3702-AT2G03300-1; -.
DR EnsemblPlants; AT2G03300.1; AT2G03300.1; AT2G03300.
DR GeneID; 814859; -.
DR Gramene; AT2G03300.1; AT2G03300.1; AT2G03300.
DR KEGG; ath:AT2G03300; -.
DR Araport; AT2G03300; -.
DR TAIR; AT2G03300; ATTX12.
DR eggNOG; ENOG502R4BG; Eukaryota.
DR HOGENOM; CLU_001561_3_1_1; -.
DR OMA; HEINFFV; -.
DR OrthoDB; 681738at2759; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SKM4; differential.
DR GO; GO:0010186; P:positive regulation of cellular defense response; IMP:TAIR.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR InterPro; IPR000157; TIR_dom.
DR InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR PANTHER; PTHR32009:SF63; RESISTANCE PROTEIN (TIR CLASS), PUTATIVE-RELATED; 1.
DR PANTHER; PTHR32009; TMV RESISTANCE PROTEIN N-LIKE; 1.
DR Pfam; PF01582; TIR; 1.
DR SMART; SM00255; TIR; 1.
DR SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR PROSITE; PS50104; TIR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT DOMAIN 5..168
FT /note="TIR"
FT /evidence="ECO:0000259|PROSITE:PS50104"
SQ SEQUENCE 203 AA; 23740 MW; 51B2BD7A43102BD8 CRC64;
MTFFSPTQVF LNYRGEQLRR SFVSHLIDAF ERNEINFFVD KYEQRGKDLK NLFLRIQESK
IALAIFSTRY TESSWCMDEL VKIKKLADKR KLHVIPIFYK VKVEDVRKQT GEFGDNFWTL
AKVSSGDQIK KWKEALECIP NKMGLSLGDK SDEADFIKEV VKAVQCVVAT IGLEEEENHF
GKKKRKDCKC ELPDLKKSRT KKL
//
