ID Q9SL38_ARATH Unreviewed; 802 AA.
AC Q9SL38;
DT 01-MAY-2000, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2000, sequence version 1.
DT 27-MAR-2024, entry version 117.
DE SubName: Full=Uncharacterized protein At2g18090 {ECO:0000313|EMBL:AAD20117.1};
GN OrderedLocusNames=At2g18090 {ECO:0000313|EMBL:AAD20117.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAD20117.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D.,
RA Fujii C.Y., Mason T., Bowman C.L., Barnstead M., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2] {ECO:0000313|EMBL:AAD20117.1}
RP NUCLEOTIDE SEQUENCE.
RA Lin X., Kaul S., Shea T.P., Fujii C.Y., Shen M., VanAken S.E.,
RA Barnstead M.E., Mason T.M., Bowman C.L., Ronning C.M., Benito M.-I.,
RA Carrera A.J., Creasy T.H., Buell C.R., Town C.D., Nierman W.C.,
RA Fraser C.M., Venter J.C.;
RL Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AAD20117.1}
RP NUCLEOTIDE SEQUENCE.
RA Town C.D., Kaul S.;
RL Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AC006201; AAD20117.1; -; Genomic_DNA.
DR PIR; B84560; B84560.
DR AlphaFoldDB; Q9SL38; -.
DR ExpressionAtlas; Q9SL38; baseline and differential.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd00072; GYF; 1.
DR CDD; cd15568; PHD5_NSD; 1.
DR CDD; cd10567; SWIB-MDM2_like; 1.
DR Gene3D; 3.30.1490.40; -; 1.
DR Gene3D; 1.10.245.10; SWIB/MDM2 domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR003169; GYF.
DR InterPro; IPR035445; GYF-like_dom_sf.
DR InterPro; IPR019835; SWIB_domain.
DR InterPro; IPR036885; SWIB_MDM2_dom_sf.
DR InterPro; IPR003121; SWIB_MDM2_domain.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46695:SF17; PHD FINGER FAMILY PROTEIN _ SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN _ GYF DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46695; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED; 1.
DR Pfam; PF02213; GYF; 1.
DR Pfam; PF02201; SWIB; 1.
DR SMART; SM00444; GYF; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00151; SWIB; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF55277; GYF domain; 1.
DR SUPFAM; SSF47592; SWIB/MDM2 domain; 1.
DR PROSITE; PS50829; GYF; 1.
DR PROSITE; PS51925; SWIB_MDM2; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 79..131
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 267..350
FT /note="DM2"
FT /evidence="ECO:0000259|PROSITE:PS51925"
FT DOMAIN 434..488
FT /note="GYF"
FT /evidence="ECO:0000259|PROSITE:PS50829"
FT REGION 16..72
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 202..230
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 382..426
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 764..802
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 37..53
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 215..230
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 779..802
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 802 AA; 88509 MW; E24468FD86F05C36 CRC64;
MPEIDLMRVD HCVSDVKLDD SSSSPPGFFD GGGVPLDSDV KLDEEDSDSL KKRGRRGRPP
RILAKASSPP ISRKRREDED VCFVCFDGGS LVLCDRRGCP KAYHPACVKR TEAFFRSRSK
WNCVCKRCVR SSEYVVVREN KGFCGICMKT IMLIENAAEA NKEKVQVDFD DQGSWEYLFK
IYWVSLKEKL GLSLDDLTKA KNPWKSSSST AAKRRTTSRV HEKDDGNSPG VMKIRRAKVR
KMDAVSVSNL GPSLDSNCSL GDRLPQLTSA ATWATNELLD FVGYMKNGDI SVLSKYDVQT
LVLEYVRRNN LQNSPQNSEI MCDSKLMRLF GKERVDNLEM LKLLDSHFID QVRSPVTDNS
AGGVTETMSY QVNAGRSCDR LNTSEQHQEG ESQQLNGHSI QVRPSSSDSR NHAVVKPDTS
ATLSNKPIDG LDTNMVWLYG DPDGKIHGPF SLYNLRQWNS SGHFPPELRI WRLGEQQHSS
ILLTDALNGQ FHKTGLLQNH SIPKQEVTAT IANDQNRSVA VPKIESRILD FSPNSVCTDQ
SVISSSNSVI TRSSDVSNKS GNNCSHAVPL DFSLSNERDT VGFISLWDKR KVESSLLVQS
PISCSLSLAT LPRNSNCSLP PHERWSAGQT DGNSAATTAC NQNGSLSGSA EKQVTATVQS
CGQNWNAATP SSASNVWDSN SGLTSFPDNQ EIDFLDLFSP TFKFNFASTT TDWQPIVAGP
DECDESVSDL LAEVEAMESQ KRLPSPTSTF RGPEELLIRH SINDSFSPAE GHSPALDVSK
GDSMSSTNDL QMHSRSNSTV HF
//
